Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639053
Identifier: 121639053
GI number: 121639053
Start: 3492430
End: 3493554
Strand: Direct
Name: 121639053
Synonym: BCG_3193
Alternate gene names: NA
Gene position: 3492430-3493554 (Clockwise)
Preceding gene: 121639052
Following gene: 121639054
Centisome position: 79.84
GC content: 66.84
Gene sequence:
>1125_bases ATGCCGCAAATGCTAGGCCCACTCGACGAGTACCCGCTACATCAGCTTCCCCAGCCGATCGCCTGGCCGGGCTCCTCCGA CCGCAACTTCTACGACCGCTCCTACTTCAACGCCCACGACCGCACCGGGAACATCTTTCTGATCACCGGTATCGGCTACT ACCCTAACCTGGGCGTGAAAGACGCGTTCGTGCTGATCAGGCGTGCGGACATACAGACCGCGGTGCATCTTTCGGATGCC ATCGACTCCGACCGGCTACACCAGCACGTCAACGGTTACCGGGTGGAGGTCGTCGAGCCGCTGCGAAAACTGCGTATCGT GCTCGACGAAACCGAAGGTGTGGCGGCCGATCTCACCTGGGAGGGCCTGTTCGACGTCGTCCAGGAACAGCCGCACGTCT TGCGCTCCGGCAACCGGGTGACCCTGGATGCGCAGCGCTTCGCGCAGCTGGGCACCTGGAGCGGCCGCATCGTCGTCGAC GGCGAACGGATCGCCGTCGATCCGGCGACCTGGCTCGGCAGCCGGGACCGGTCCTGGGGCATCCGGCCGGTGGGGGAACC AGAACCGGCGGGCCGGCCCGCCGACCCACCCTTCGAGGGCATGTGGTGGCTGTATGTGCCGTTGGCCTTCGACGACTTCG CCGTCGTGCTGATCATCCAGGAAGAACCCGACGGGTTCCGCTCGCTCAACGACTGCACCCGGATCTGGCGTGACGGCCAC GTCGAGCAGCTGGGCTGGCCGCGGGTGCGGATCCACTACCGCTCCGGCACCCGCATCCCGACCGGGGCGACGATCGAGGC AAGCACCCCCGACGGCGCGCCGGTGCACTTCGACGTGGAGTCCAAACTGGCGGTGCCGACCCATGTCGGTGGCGGCTACG GGGGTGACTCGGACTGGTCACATGGCATGTGGAAGGGCGAGAAGTTCGTCGAGCGAAGAACCTACGACATGACCGATCCG ACGATCATCGCGCGGGCCGGCTTCGGCGTCATCGACCACGTCGGTCGCGCGCTATGCCGCGACGGCGACGGGAATCCAGT GCAGGGCTGGGGTCTGTTTGAACACGGGGCGCTGGGCCGCCACGACCCATCGGGGTTCGCCGACTGGTCTACGCTGGCGC CCTAG
Upstream 100 bases:
>100_bases CGCGGCGAGTGCACTTCGGCGAGATCGAGAAGCCCGACGATGTGGAGTCGCTGTTCTATCACGCCGGCTTGATGAAGCAT CTTCTTGGAGAGGAGCACTA
Downstream 100 bases:
>100_bases GCGCTTCAGGCTTACTTCGGCACCGGTGAGGCTATCCGCATTCGCGAGTCCAGGGTTCCTGGGCGCCGGCCGGGAAACGG CCCGAAAACGACGGCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGYYPNLGVKDAFVLIRRADIQTAVHLSDA IDSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTWEGLFDVVQEQPHVLRSGNRVTLDAQRFAQLGTWSGRIVVD GERIAVDPATWLGSRDRSWGIRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRSLNDCTRIWRDGH VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVESKLAVPTHVGGGYGGDSDWSHGMWKGEKFVERRTYDMTDP TIIARAGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP
Sequences:
>Translated_374_residues MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGYYPNLGVKDAFVLIRRADIQTAVHLSDA IDSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTWEGLFDVVQEQPHVLRSGNRVTLDAQRFAQLGTWSGRIVVD GERIAVDPATWLGSRDRSWGIRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRSLNDCTRIWRDGH VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVESKLAVPTHVGGGYGGDSDWSHGMWKGEKFVERRTYDMTDP TIIARAGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP >Mature_373_residues PQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGYYPNLGVKDAFVLIRRADIQTAVHLSDAI DSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTWEGLFDVVQEQPHVLRSGNRVTLDAQRFAQLGTWSGRIVVDG ERIAVDPATWLGSRDRSWGIRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRSLNDCTRIWRDGHV EQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVESKLAVPTHVGGGYGGDSDWSHGMWKGEKFVERRTYDMTDPT IIARAGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41760; Mature: 41629
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGYYPNLGVK CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DAFVLIRRADIQTAVHLSDAIDSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTW CEEEEEECCCHHHEEHHHHHCCHHHHHHHHCCEEEHHHHHHHHHEEEEECCCCCEEECCH EGLFDVVQEQPHVLRSGNRVTLDAQRFAQLGTWSGRIVVDGERIAVDPATWLGSRDRSWG HHHHHHHHCCCHHHHCCCEEEEEHHHHHHHCCCCCEEEECCCEEEECCHHHCCCCCCCCC IRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRSLNDCTRIWRDGH CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCC VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVESKLAVPTHVGGGYGGDSDWS HHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEECCEECCCCCCCCCCCC HGMWKGEKFVERRTYDMTDPTIIARAGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGR CCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HDPSGFADWSTLAP CCCCCCCCCCCCCC >Mature Secondary Structure PQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGYYPNLGVK CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DAFVLIRRADIQTAVHLSDAIDSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTW CEEEEEECCCHHHEEHHHHHCCHHHHHHHHCCEEEHHHHHHHHHEEEEECCCCCEEECCH EGLFDVVQEQPHVLRSGNRVTLDAQRFAQLGTWSGRIVVDGERIAVDPATWLGSRDRSWG HHHHHHHHCCCHHHHCCCEEEEEHHHHHHHCCCCCEEEECCCEEEECCHHHCCCCCCCCC IRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRSLNDCTRIWRDGH CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCC VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVESKLAVPTHVGGGYGGDSDWS HHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEECCEECCCCCCCCCCCC HGMWKGEKFVERRTYDMTDPTIIARAGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGR CCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HDPSGFADWSTLAP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA