Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is yieJ [C]
Identifier: 121638176
GI number: 121638176
Start: 2543867
End: 2544505
Strand: Direct
Name: yieJ [C]
Synonym: BCG_2311
Alternate gene names: 121638176
Gene position: 2543867-2544505 (Clockwise)
Preceding gene: 121638175
Following gene: 121638177
Centisome position: 58.15
GC content: 64.48
Gene sequence:
>639_bases ATGGACCAGTCGGCCAACCATGCGTGTCTGCCCACCCCGCTGGCGAGCACAACAGGGCGCGGGCAAGATCATGAGATGCC TGTCGAAGAGACCTCCACCCCCCAGAAGCTGCCCCAATTTCGTTATCACCCCGATCCCGTCGGCACCGGCTCGATAGTCG CCGACGAGGTGAGCTGCGTGAGCTGCGAGCAACGTCGGCCCTACACCTACACCGGCCCGGTGTATGCGGAGGAGGAGCTT AACGAGGCCATCTGTCCTTGGTGTATCGCAGATGGCAGTGCGGCGAGTCGCTTCGATGCCACGTTCACCGACGCCATGTG GGCGGTGCCCGACGACGTTCCAGAGGACGTGACCGAGGAAGTGCTGTGCCGAACACCCGGGTTCACGGGCTGGCTGCAGG AGGAATGGTTGCATCACTGCGGGGACGCCGCCGCCTTCCTTGGCCCGGTGGGCGCCAGCGAGGTGGCCGACCTCCCTGAC GCCCTGGATGCGCTGCGCAATGAGTACCGCGGCTACGACTGGCCCGCCGACAAAATCGAGGAATTCATCCTGACGCTCGA TCGAAACGGGCTGGCGACCGCCTACCTCTTCAGGTGCCTGAGCTGCGGCGTCCACTTGGCCTACGCCGATTTCGCTTAA
Upstream 100 bases:
>100_bases GAAGTCTGACACCGTAGGCGCCTCGTTGATCGCGTTTTCGCCGAGAAACGTGAAGGCCGTTTGCCCGCCCGTGCGGATCA GCTACGATCAAGGCGGCCAC
Downstream 100 bases:
>100_bases CCTCGGCGGCGACTGAGTCGACGCGAGCGCGGATATCGGACGCTTTTGCACAACAATGGTTCCGACGTGGCACAGCTCAG AGAGGAGCAGATCATGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MDQSANHACLPTPLASTTGRGQDHEMPVEETSTPQKLPQFRYHPDPVGTGSIVADEVSCVSCEQRRPYTYTGPVYAEEEL NEAICPWCIADGSAASRFDATFTDAMWAVPDDVPEDVTEEVLCRTPGFTGWLQEEWLHHCGDAAAFLGPVGASEVADLPD ALDALRNEYRGYDWPADKIEEFILTLDRNGLATAYLFRCLSCGVHLAYADFA
Sequences:
>Translated_212_residues MDQSANHACLPTPLASTTGRGQDHEMPVEETSTPQKLPQFRYHPDPVGTGSIVADEVSCVSCEQRRPYTYTGPVYAEEEL NEAICPWCIADGSAASRFDATFTDAMWAVPDDVPEDVTEEVLCRTPGFTGWLQEEWLHHCGDAAAFLGPVGASEVADLPD ALDALRNEYRGYDWPADKIEEFILTLDRNGLATAYLFRCLSCGVHLAYADFA >Mature_212_residues MDQSANHACLPTPLASTTGRGQDHEMPVEETSTPQKLPQFRYHPDPVGTGSIVADEVSCVSCEQRRPYTYTGPVYAEEEL NEAICPWCIADGSAASRFDATFTDAMWAVPDDVPEDVTEEVLCRTPGFTGWLQEEWLHHCGDAAAFLGPVGASEVADLPD ALDALRNEYRGYDWPADKIEEFILTLDRNGLATAYLFRCLSCGVHLAYADFA
Specific function: Unknown
COG id: COG3196
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0167 family [H]
Homologues:
Organism=Escherichia coli, GI1790153, Length=198, Percent_Identity=36.3636363636364, Blast_Score=134, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005363 [H]
Pfam domain/function: PF03691 UPF0167 [H]
EC number: NA
Molecular weight: Translated: 23311; Mature: 23311
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSANHACLPTPLASTTGRGQDHEMPVEETSTPQKLPQFRYHPDPVGTGSIVADEVSCV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEHHHHHHH SCEQRRPYTYTGPVYAEEELNEAICPWCIADGSAASRFDATFTDAMWAVPDDVPEDVTEE HHHCCCCEEECCCCCCHHHHHHHHCCEEECCCCCCHHCCCHHHHHHHCCCCCCHHHHHHH VLCRTPGFTGWLQEEWLHHCGDAAAFLGPVGASEVADLPDALDALRNEYRGYDWPADKIE HHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHH EFILTLDRNGLATAYLFRCLSCGVHLAYADFA HHHHHHCCCCHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure MDQSANHACLPTPLASTTGRGQDHEMPVEETSTPQKLPQFRYHPDPVGTGSIVADEVSCV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEHHHHHHH SCEQRRPYTYTGPVYAEEELNEAICPWCIADGSAASRFDATFTDAMWAVPDDVPEDVTEE HHHCCCCEEECCCCCCHHHHHHHHCCEEECCCCCCHHCCCHHHHHHHCCCCCCHHHHHHH VLCRTPGFTGWLQEEWLHHCGDAAAFLGPVGASEVADLPDALDALRNEYRGYDWPADKIE HHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHH EFILTLDRNGLATAYLFRCLSCGVHLAYADFA HHHHHHCCCCHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]