Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638147
Identifier: 121638147
GI number: 121638147
Start: 2517152
End: 2518381
Strand: Direct
Name: 121638147
Synonym: BCG_2282
Alternate gene names: NA
Gene position: 2517152-2518381 (Clockwise)
Preceding gene: 121638145
Following gene: 121638148
Centisome position: 57.54
GC content: 67.48
Gene sequence:
>1230_bases GTGGGTGCGAACGGTGATGTCGCGTTGAGCCGCATCGGCGCCACCCGTCCGGCATTGAGCGCGTGGCGATTCGTCACAGT GTTCGGGGTGGTCGGCCTGCTCGCCGACGTCGTGTATGAAGGGGCCCGTTCGATCACCGGCCCGCTGCTGGCTTCGTTGG GAGCGACCGGACTGGTGGTCGGAGTCGTCACCGGCGTCGGTGAGGCCGCCGCCTTGGGCTTGCGGCTGGTGTCGGGGCCA TTGGCCGATCGAAGCCGACGGTTTTGGGCCTGGACCATCGCCGGCTACACCCTGACGGTGGTAACGGTTCCGCTGCTCGG CATCGCGGGCGCCCTGTGGGTGGCGTGCGCGTTGGTCATCGCCGAGCGAGTCGGGAAAGCTGTGCGCGGCCCCGCCAAAG ACACCCTGCTGTCGCACGCGGCCAGTGTGACCGGCCGAGGCCGCGGTTTCGCCGTGCACGAGGCGCTGGACCAGGTCGGT GCGATGATCGGCCCTCTCACCGTTGCCGGGATGCTCGCGATCACCGGGAATGCCTATGCGCCCGCGCTCGGCGTGCTGAC CCTGCCCGGCGGTGCCGCCCTTGCTCTGTTGCTGTGGCTGCAGCGTCGGGTGCCCCGCCCGGAGTCCTACGAGGACTGTC CGGTTGTCCTCGGTAATCCTTCGGCGCCGCGACCCTGGGCGCTGCCGGCGCAGTTCTGGCTGTACTGCGGGTTCACCGCG ATCACCATGCTGGGGTTTGGCACGTTCGGGTTGCTGTCGTTTCACATGGTCAGCCACGGCGTGCTGGCCGCCGCCATGGT CCCGGTGGTCTATGCGGCCGCAATGGCCGCAGATGCGCTGACGGCCTTGGCCTCAGGCTTCAGCTATGACAGATATGGCG CGAAAACCCTTGCCGTTCTGCCGATTCTGTCGATTCTGGTAGTGCTATTCGCCTTCACGGACAACGTCACAATGGTGGTC ATTGGCACGTTGGTGTGGGGCGCAGCGGTCGGAATACAAGAGTCCACGCTGCGCGGCGTGGTGGCCGACCTGGTCGCCAG CCCACGGCGGGCCAGCGCCTACGGCGTGTTCGCCGCAGGGCTGGGCGCTGCGACCGCCGGGGGCGGCGCCCTCATCGGCT GGCTGTACGACATCTCCATCGGCACGCTCGTTGTGGTGGTGATCGCACTTGAACTGATGGCCCTGGTGATGATGTTCGCG ATCCGACTACCCCGCGTAGCACCGAGCTAA
Upstream 100 bases:
>100_bases AGCCGTGTTGAGAAATGAGTTCGGCCGTCGGCAGCAACCTCCCCACTCAGCAATCCCAGCTTCACCCTAAACCTGGCGTT CGTACGCCACCTAGCATCTG
Downstream 100 bases:
>100_bases AGAAGCGATCAGGCGGCCCAACGGAACAGCAGGTTGGTATGCGACAACATGCTTGACCGGCACGCCAACAAGCACGACTG CCACCGATCCAGGTAAGTGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MGANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVVGVVTGVGEAAALGLRLVSGP LADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVIAERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVG AMIGPLTVAGMLAITGNAYAPALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTA ITMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVLPILSILVVLFAFTDNVTMVV IGTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAGLGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFA IRLPRVAPS
Sequences:
>Translated_409_residues MGANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVVGVVTGVGEAAALGLRLVSGP LADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVIAERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVG AMIGPLTVAGMLAITGNAYAPALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTA ITMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVLPILSILVVLFAFTDNVTMVV IGTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAGLGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFA IRLPRVAPS >Mature_408_residues GANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVVGVVTGVGEAAALGLRLVSGPL ADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVIAERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVGA MIGPLTVAGMLAITGNAYAPALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTAI TMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVLPILSILVVLFAFTDNVTMVVI GTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAGLGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFAI RLPRVAPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2265_MYCTU (P64961)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: E70729 - RefSeq: NP_216781.1 - RefSeq: NP_336795.1 - ProteinModelPortal: P64961 - EnsemblBacteria: EBMYCT00000001449 - EnsemblBacteria: EBMYCT00000072678 - GeneID: 887976 - GeneID: 924099 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2327 - KEGG: mtu:Rv2265 - TIGR: MT2327 - TubercuList: Rv2265 - GeneTree: EBGT00050000014791 - HOGENOM: HBG575542 - OMA: ADATYEG - ProtClustDB: CLSK791734 - InterPro: IPR011701 - InterPro: IPR016196
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 41891; Mature: 41760
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x169aa2e0)-; HASH(0x16b0b160)-; HASH(0x16742bec)-; HASH(0x16b2bee0)-; HASH(0x1731f6f0)-; HASH(0x171d2b38)-; HASH(0x16f29594)-; HASH(0x1722813c)-; HASH(0x16e97fa4)-; HASH(0x16bbaddc)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVV CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GVVTGVGEAAALGLRLVSGPLADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVI HHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH AERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVGAMIGPLTVAGMLAITGNAYA HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTA CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH ITMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHH PILSILVVLFAFTDNVTMVVIGTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC LGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFAIRLPRVAPS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure GANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVV CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GVVTGVGEAAALGLRLVSGPLADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVI HHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH AERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVGAMIGPLTVAGMLAITGNAYA HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTA CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH ITMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHH PILSILVVLFAFTDNVTMVVIGTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC LGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFAIRLPRVAPS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036