Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638084
Identifier: 121638084
GI number: 121638084
Start: 2446875
End: 2447567
Strand: Direct
Name: 121638084
Synonym: BCG_2219
Alternate gene names: NA
Gene position: 2446875-2447567 (Clockwise)
Preceding gene: 121638082
Following gene: 121638087
Centisome position: 55.93
GC content: 66.23
Gene sequence:
>693_bases ATGCCCGGTCCCCACTCGCCGAACCCCGGTGTCGGCACCAACGGACCGGCGCCGTACCCCGAGCCCTCATCCCACGAACC CCAAGCCCTGGACTACCCCCACGACCTCGGCGCCGCCGAACCGGCCTTCGCCCCGGGACCGGCAGACGACGCGGCGCTGC CGCCCGCCGCATATCCCGGCGTGCCGCCGCAGGTGTCCTACCCGAAGCGACGGCACAAGCGGCTGCTGATCGGCATTGTG GTAGCCCTCGCGCTGGTGTCGGCTATGACGGCGGCGATCATATACGGGGTTCGCACCAACGGAGCCAACACGGCAGGCAC ATTCTCGGAGGGACCGGCCAAAACCGCGATTCAGGGATACCTCAACGCGCTGGAGAACCGCGATGTGGACACCATCGTTC GCAATGCGCTGTGCGGTATCCACGACGGCGTGCGCGACAAGCGCTCCGATCAGGCCTTGGCCAAGCTGAGCAGCGACGCG TTCCGCAAGCAGTTCTCCCAGGTCGAAGTGACCTCGATCGACAAAATCGTGTACTGGTCGCAATATCAGGCCCAGGTGCT GTTCACCATGCAGGTGACACCTGCCGCCGGCGGCCCGCCACGCGGTCAGGTGCAAGGCATCGCTCAGTTGCTTTTCCAGC GCGGTCAGGTCTTGGTGTGCTCGTACGTGTTGCGCACCGCGGGGTCGTACTAG
Upstream 100 bases:
>100_bases CTGCCTAGGGAGCTCACCTGATTGCCGATGCTGCCGGCTGACGCGACGGGCGGTTGTCGCCCTAGCAGCTGGTCCCGTCC ACCACCCTAGGAGAACCACA
Downstream 100 bases:
>100_bases CGTTTTATCAGTTGAACGAATCCCCGCACGCGCAGGAGCCGGTGGCGTTGGGATTGTCGATGGTGAAGCCTTGCTTCTCA ATAGTGTCGACGAAATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADDAALPPAAYPGVPPQVSYPKRRHKRLLIGIV VALALVSAMTAAIIYGVRTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDKRSDQALAKLSSDA FRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAGGPPRGQVQGIAQLLFQRGQVLVCSYVLRTAGSY
Sequences:
>Translated_230_residues MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADDAALPPAAYPGVPPQVSYPKRRHKRLLIGIV VALALVSAMTAAIIYGVRTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDKRSDQALAKLSSDA FRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAGGPPRGQVQGIAQLLFQRGQVLVCSYVLRTAGSY >Mature_229_residues PGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADDAALPPAAYPGVPPQVSYPKRRHKRLLIGIVV ALALVSAMTAAIIYGVRTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDKRSDQALAKLSSDAF RKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAGGPPRGQVQGIAQLLFQRGQVLVCSYVLRTAGSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2203_MYCTU (P64949)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: D70785 - RefSeq: NP_216719.1 - RefSeq: NP_336731.1 - EnsemblBacteria: EBMYCT00000001687 - EnsemblBacteria: EBMYCT00000072458 - GeneID: 888318 - GeneID: 924167 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2259 - KEGG: mtu:Rv2203 - TIGR: MT2259 - TubercuList: Rv2203 - GeneTree: EBGT00050000015308 - HOGENOM: HBG570155 - OMA: NEPLEYP - ProtClustDB: CLSK791699
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24372; Mature: 24241
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x170870f0)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADDAALPPAAYPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC VPPQVSYPKRRHKRLLIGIVVALALVSAMTAAIIYGVRTNGANTAGTFSEGPAKTAIQGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LNALENRDVDTIVRNALCGIHDGVRDKRSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC QYQAQVLFTMQVTPAAGGPPRGQVQGIAQLLFQRGQVLVCSYVLRTAGSY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCH >Mature Secondary Structure PGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADDAALPPAAYPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC VPPQVSYPKRRHKRLLIGIVVALALVSAMTAAIIYGVRTNGANTAGTFSEGPAKTAIQGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LNALENRDVDTIVRNALCGIHDGVRDKRSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC QYQAQVLFTMQVTPAAGGPPRGQVQGIAQLLFQRGQVLVCSYVLRTAGSY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036