Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638041
Identifier: 121638041
GI number: 121638041
Start: 2400641
End: 2401675
Strand: Reverse
Name: 121638041
Synonym: BCG_2176c
Alternate gene names: NA
Gene position: 2401675-2400641 (Counterclockwise)
Preceding gene: 121638042
Following gene: 121638040
Centisome position: 54.9
GC content: 73.04
Gene sequence:
>1035_bases ATGAAATTTGTCAACCATATTGAGCCCGTCGCGCCCCGCCGAGCCGGCGGCGCGGTCGCCGAGGTCTATGCCGAGGCCCG CCGCGAGTTCGGCCGGCTGCCCGAGCCGCTCGCCATGCTGTCCCCGGACGAGGGACTGCTCACCGCCGGCTGGGCGACGT TGCGCGAGACACTGCTGGTGGGCCAGGTGCCGCGTGGCCGCAAGGAAGCCGTCGCCGCCGCCGTCGCGGCCAGCCTGCGC TGCCCCTGGTGCGTCGACGCACACACCACCATGCTGTACGCGGCAGGCCAAACCGACACCGCCGCGGCGATCTTGGCCGG CACAGCACCTGCCGCCGGTGACCCGAACGCGCCGTATGTGGCGTGGGCGGCAGGAACCGGGACACCGGCGGGACCGCCGG CACCGTTCGGCCCGGATGTCGCCGCCGAATACCTGGGCACCGCGGTGCAATTCCACTTCATCGCACGCCTGGTCCTGGTG CTGCTGGACGAAACCTTCCTGCCGGGGGGCCCGCGCGCCCAACAGCTCATGCGCCGCGCCGGTGGACTGGTGTTCGCCCG CAAGGTGCGCGCGGAGCATCGGCCGGGCCGCTCCACCCGCCGGCTCGAGCCGCGAACGCTGCCCGACGATCTGGCATGGG CAACACCGTCCGAGCCCATAGCAACCGCGTTCGCCGCGCTCAGCCACCACCTGGACACCGCGCCGCACCTGCCGCCACCG ACTCGTCAGGTGGTCAGGCGGGTCGTGGGGTCGTGGCACGGCGAGCCAATGCCGATGAGCAGTCGCTGGACGAACGAGCA CACCGCCGAGCTGCCCGCCGACCTGCACGCGCCCACCCGTCTTGCCCTGCTGACCGGCCTGGCCCCGCATCAGGTGACCG ACGACGACGTCGCCGCGGCCCGATCCCTGCTCGACACCGATGCGGCGCTGGTTGGCGCCCTGGCCTGGGCCGCCTTCACC GCCGCGCGGCGCATCGGCACCTGGATCGGCGCCGCCGCCGAGGGCCAGGTGTCGCGGCAAAACCCGACTGGGTGA
Upstream 100 bases:
>100_bases CGCTGCTGCTGCTCGACGACGACGGCGCCGGAGAGCGGGCGCGAACGGCGATCGACGCGGCCCTGGCCAGAGTCGGCACC ACCCAGGAGGGAGTCGAATC
Downstream 100 bases:
>100_bases GTGTGCGCGCCCTGTCGGTAGGGTGTCATCGCTGGCCCGAGGGATCTCGCGGCGGCGAACGGAGGTGGCGACACAGGTGG AGGCTGCGCCCACTGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAAAVAASLR CPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLV LLDETFLPGGPRAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFT AARRIGTWIGAAAEGQVSRQNPTG
Sequences:
>Translated_344_residues MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAAAVAASLR CPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLV LLDETFLPGGPRAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFT AARRIGTWIGAAAEGQVSRQNPTG >Mature_344_residues MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLVGQVPRGRKEAVAAAVAASLR CPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYVAWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLV LLDETFLPGGPRAQQLMRRAGGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAARSLLDTDAALVGALAWAAFT AARRIGTWIGAAAEGQVSRQNPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36377; Mature: 36377
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV CCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHEECCCCCCCCCCCCEE AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHCCCHHHHHHHCCCCCCCCCHHHHHH RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKFVNHIEPVAPRRAGGAVAEVYAEARREFGRLPEPLAMLSPDEGLLTAGWATLRETLLV CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH GQVPRGRKEAVAAAVAASLRCPWCVDAHTTMLYAAGQTDTAAAILAGTAPAAGDPNAPYV CCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHEECCCCCCCCCCCCEE AWAAGTGTPAGPPAPFGPDVAAEYLGTAVQFHFIARLVLVLLDETFLPGGPRAQQLMRRA EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GGLVFARKVRAEHRPGRSTRRLEPRTLPDDLAWATPSEPIATAFAALSHHLDTAPHLPPP CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TRQVVRRVVGSWHGEPMPMSSRWTNEHTAELPADLHAPTRLALLTGLAPHQVTDDDVAAA HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHCCCHHHHHHHCCCCCCCCCHHHHHH RSLLDTDAALVGALAWAAFTAARRIGTWIGAAAEGQVSRQNPTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA