Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is murE
Identifier: 121638040
GI number: 121638040
Start: 2399011
End: 2400618
Strand: Reverse
Name: murE
Synonym: BCG_2175c
Alternate gene names: 121638040
Gene position: 2400618-2399011 (Counterclockwise)
Preceding gene: 121638041
Following gene: 121638039
Centisome position: 54.88
GC content: 73.13
Gene sequence:
>1608_bases GTGTCATCGCTGGCCCGAGGGATCTCGCGGCGGCGAACGGAGGTGGCGACACAGGTGGAGGCTGCGCCCACTGGCTTGCG CCCCAACGCCGTCGTGGGCGTTCGGTTGGCCGCACTGGCCGATCAGGTCGGCGCGGCCCTGGCCGAGGGTCCAGCTCAGC GTGCCGTCACCGAGGACCGGACGGTCACCGGGGTCACGCTGCGCGCCCAGGACGTGTCACCCGGTGACCTGTTCGCCGCC CTGACCGGCTCGACCACCCACGGGGCCCGCCACGTCGGCGACGCGATCGCACGCGGCGCCGTCGCGGTGCTCACCGACCC CGCCGGGGTCGCCGAGATCGCCGGACGAGCGGCCGTGCCCGTGTTGGTGCACCCCGCACCCCGCGGCGTGCTCGGCGGCT TGGCCGCCACCGTGTACGGGCATCCGTCCGAGCGGTTGACGGTTATCGGGATCACCGGAACGTCCGGCAAGACCACCACC ACCTATCTGGTCGAGGCCGGGTTACGGGCTGCCGGACGCGTCGCCGGGCTGATCGGCACCATCGGCATCCGCGTCGGCGG CGCCGACCTTCCCAGCGCGCTGACCACCCCGGAGGCCCCCACGCTGCAGGCGATGCTGGCGGCGATGGTCGAACGCGGGG TGGACACCGTGGTCATGGAGGTGTCCAGCCACGCGCTGGCGCTGGGCCGGGTGGACGGCACCCGGTTCGCCGTCGGCGCC TTCACCAATCTCTCCCGTGACCACCTGGATTTCCACCCCAGCATGGCCGACTACTTCGAGGCCAAGGCGTCATTGTTCGA TCCGGACTCGGCACTGCGCGCCCGCACCGCCGTGGTGTGCATCGACGACGACGCCGGGCGCGCGATGGCGGCGCGGGCCG CCGACGCGATCACCGTCAGCGCCGCCGACCGGCCCGCACACTGGCGCGCCACGGATGTGGCGCCCACGGACGCGGGCGGG CAACAATTCACCGCCATCGACCCCGCCGGCGTAGGGCATCACATCGGAATCCGGCTACCGGGCCGCTACAACGTCGCCAA TTGCCTGGTCGCCCTGGCGATTCTGGACACCGTCGGGGTCTCCCCGGAACAGGCGGTGCCGGGCCTGCGTGAGATCCGGG TCCCGGGGCGGCTCGAGCAGATCGACCGCGGCCAGGGCTTTCTCGCGCTGGTCGACTACGCGCACAAACCGGAAGCGCTG CGGTCGGTGCTGACCACCTTGGCGCACCCGGACCGCCGGCTGGCGGTGGTGTTCGGCGCCGGCGGCGATCGTGACCCGGG CAAGCGGGCCCCGATGGGCCGGATAGCCGCGCAGCTGGCCGACTTGGTGGTCGTCACCGACGACAACCCGCGTGACGAAG ATCCCACGGCGATCCGCCGCGAAATCCTGGCTGGGGCGGCCGAAGTCGGCGGTGATGCCCAGGTCGTCGAGATCGCAGAC CGGCGGGACGCGATCCGGCACGCGGTCGCCTGGGCGCGCCCCGGCGACGTGGTGCTCATCGCCGGCAAAGGCCACGAGAC CGGGCAACGCGGCGGCGGGCGGGTCCGCCCGTTCGACGACCGGGTGGAGCTGGCTGCCGCGCTAGAGGCCCTCGAGCGGC GCGCATGA
Upstream 100 bases:
>100_bases ACCGCCGCGCGGCGCATCGGCACCTGGATCGGCGCCGCCGCCGAGGGCCAGGTGTCGCGGCAAAACCCGACTGGGTGAGT GTGCGCGCCCTGTCGGTAGG
Downstream 100 bases:
>100_bases TCGAGCTGACCGTCGCGCAGATCGCCGAGATCGTCGGGGGCGCAGTGGCCGATATCTCCCCGCAAGACGCCGCGCACCGC CGCGTCACCGGGACCGTCGA
Product: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
Products: NA
Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MSSLARGISRRRTEVATQVEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDRTVTGVTLRAQDVSPGDLFAA LTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTT TYLVEAGLRAAGRVAGLIGTIGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGA FTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVSAADRPAHWRATDVAPTDAGG QQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGVSPEQAVPGLREIRVPGRLEQIDRGQGFLALVDYAHKPEAL RSVLTTLAHPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIAD RRDAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA
Sequences:
>Translated_535_residues MSSLARGISRRRTEVATQVEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDRTVTGVTLRAQDVSPGDLFAA LTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTT TYLVEAGLRAAGRVAGLIGTIGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGA FTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVSAADRPAHWRATDVAPTDAGG QQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGVSPEQAVPGLREIRVPGRLEQIDRGQGFLALVDYAHKPEAL RSVLTTLAHPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIAD RRDAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA >Mature_534_residues SSLARGISRRRTEVATQVEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDRTVTGVTLRAQDVSPGDLFAAL TGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTTT YLVEAGLRAAGRVAGLIGTIGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAF TNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVSAADRPAHWRATDVAPTDAGGQ QFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGVSPEQAVPGLREIRVPGRLEQIDRGQGFLALVDYAHKPEALR SVLTTLAHPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIADR RDAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA
Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family. MurE subfamily
Homologues:
Organism=Escherichia coli, GI1786273, Length=481, Percent_Identity=39.2931392931393, Blast_Score=232, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURE_MYCBO (P65478)
Other databases:
- EMBL: BX248341 - RefSeq: NP_855831.1 - ProteinModelPortal: P65478 - SMR: P65478 - EnsemblBacteria: EBMYCT00000015657 - GeneID: 1091262 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2182c - GeneTree: EBGT00050000015779 - HOGENOM: HBG602753 - OMA: VLGCGGD - ProtClustDB: PRK00139 - BioCyc: MBOV233413:MB2182C-MONOMER - BRENDA: 6.3.2.13 - GO: GO:0005737 - HAMAP: MF_00208 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005761 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - TIGRFAMs: TIGR01085
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.13
Molecular weight: Translated: 55341; Mature: 55210
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: BINDING 67-67 BINDING 222-222 BINDING 230-230 BINDING 424-424 BINDING 502-502 BINDING 506-506
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLARGISRRRTEVATQVEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCC TVTGVTLRAQDVSPGDLFAALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVP EEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCC VLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTTTYLVEAGLRAAGRVAGLIGT EEECCCCCCHHHHHHHHEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHH IGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGA HEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEE FTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVS CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCHHHHHCCCEEEEE AADRPAHWRATDVAPTDAGGQQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGV CCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC SPEQAVPGLREIRVPGRLEQIDRGQGFLALVDYAHKPEALRSVLTTLAHPDRRLAVVFGA CHHHHCCCHHEECCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEC GGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIAD CCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHH RRDAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSLARGISRRRTEVATQVEAAPTGLRPNAVVGVRLAALADQVGAALAEGPAQRAVTEDR CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCC TVTGVTLRAQDVSPGDLFAALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVP EEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCC VLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTTTYLVEAGLRAAGRVAGLIGT EEECCCCCCHHHHHHHHEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHH IGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGA HEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEE FTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAITVS CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCHHHHHCCCEEEEE AADRPAHWRATDVAPTDAGGQQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGV CCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC SPEQAVPGLREIRVPGRLEQIDRGQGFLALVDYAHKPEALRSVLTTLAHPDRRLAVVFGA CHHHHCCCHHEECCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEC GGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVGGDAQVVEIAD CCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHH RRDAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALEALERRA HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972