Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is argE [C]
Identifier: 121638023
GI number: 121638023
Start: 2380386
End: 2381732
Strand: Reverse
Name: argE [C]
Synonym: BCG_2158c
Alternate gene names: 121638023
Gene position: 2381732-2380386 (Counterclockwise)
Preceding gene: 121638024
Following gene: 121638022
Centisome position: 54.45
GC content: 65.11
Gene sequence:
>1347_bases GTGACAGATGAGACCGGGGCTTCAAGCGACCACAGCGATGATGTCGCCCAGGTCGTCAGCAGGCTAATCCGGTTCGATAC CACCAACAGTGGCGAACCCGGGACCACCAAGGGTGAGGCCGAGTGCGCACGCTGGGTCGCCGAGCAGCTCGCCGAAGTCG GCTACCAACCTGAATACGTTGAATCCGGTGCGCCCGGCCGCGGCAACGTGTTCGCCCGGCTGGCGGGCGCCGATAGTTCT CGCGGCGCGCTGCTGATCCACGGGCATCTCGATGTGGTGCCGGCTGAACCGGCCGAATGGAGTGTGCACCCGTTTTCCGG CGCCATCGAAGACGGCTACGTCTGGGGTCGTGGCGCGGTCGACATGAAGGACATGGTGGGCATGATGATTGTGGTTGCCC GCCACCTTCGTCAGGCCGCTATCGTGCCGCCACGGGATCTGGTGTTCGCGTTCGTTGCCGACGAGGAGCACGGCGGCAAG TACGGGTCGCACTGGCTGGTCGACAATAGGCCCGATCTGTTCGACGGCATCACCGAGGCAATCGGTGAAGTCGGCGGTTT CTCGCTAACCGTGCCCCGGCACGATGGTGGCGAACGTCGCCTGTACCTGATTGAAACCGCCGAGAAGGGCATCCAGTGGA TGCGGCTGACGGCACGCGGCCGGGCTGGGCACGGCTCGATGGTGCACGACCAGAACGCGGTCACCGCCGTTTGTGAGGCG GTCGCTCGCCTAGGGCGCCACCAGTTTCCGCTGGTCTGCACTGACACCGTCGCCCAGTTCTTGGCCGTAGTCGGAGAGGA GACCGGACTGGCCTTCGACCTTGACTCGCCGGACCTGGCCGGGACGATCGACAAGCTTGGCCCGATGGCCCGCATGTTGA AGGCAGTGCTACATGACACCGCGAACCCTACGATGCTCAAGGCCGGATACAAGGCCAACGTCGTCCCGGCGACCGCGGAG GCAGTTGTGGACTGCCGCGTGCTTCCGGGTCGCCGGGCGGCGTTCGAGGCCGAAGTCGACGCGCTGATCGGACCCGACGT GACCCGGGAGTGGGTCAGCGATCTGCCATCATATGAGACCACCTTCGACGGTGATCTGGTCGCCGCCATGAACGCCGCGG TGTTGGCGGTCGACCCAGACGGTCGCACGGTGCCGTACATGCTGTCCGGTGGAACGGACGCGAAGGCGTTCGCGCGCTTG GGTATTCGGTGCTTTGGCTTCAGCCCGCTGCGCTTGCCGCCGGACTTGGATTTCACCTCGTTGTTCCACGGCGTCGACGA GCGGGTACCCATCGATGGGTTGCGGTTCGGCACCGAGGTGCTAACGCACTTGCTGACACACTGCTAG
Upstream 100 bases:
>100_bases CAATCAGCCCACGTAAGCAAATCCAGCTCGGCGACGACGCGGGCCCGGCGCGCCAGGGGCGATCGGCTCGCCAGGGTTAC GAGTGGTAGGAAAGGTGACT
Downstream 100 bases:
>100_bases TCGAAAACGAGGCTAGTCGCAACGTCGATCACACGAGAGGACTGACCATGACAACTTCACCCGACCCGTATGCCGCGCTG CCCAAGCTGCCGTCCTTCAG
Product: hypothetical protein
Products: Acetate; Ornithine [C]
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTDETGASSDHSDDVAQVVSRLIRFDTTNSGEPGTTKGEAECARWVAEQLAEVGYQPEYVESGAPGRGNVFARLAGADSS RGALLIHGHLDVVPAEPAEWSVHPFSGAIEDGYVWGRGAVDMKDMVGMMIVVARHLRQAAIVPPRDLVFAFVADEEHGGK YGSHWLVDNRPDLFDGITEAIGEVGGFSLTVPRHDGGERRLYLIETAEKGIQWMRLTARGRAGHGSMVHDQNAVTAVCEA VARLGRHQFPLVCTDTVAQFLAVVGEETGLAFDLDSPDLAGTIDKLGPMARMLKAVLHDTANPTMLKAGYKANVVPATAE AVVDCRVLPGRRAAFEAEVDALIGPDVTREWVSDLPSYETTFDGDLVAAMNAAVLAVDPDGRTVPYMLSGGTDAKAFARL GIRCFGFSPLRLPPDLDFTSLFHGVDERVPIDGLRFGTEVLTHLLTHC
Sequences:
>Translated_448_residues MTDETGASSDHSDDVAQVVSRLIRFDTTNSGEPGTTKGEAECARWVAEQLAEVGYQPEYVESGAPGRGNVFARLAGADSS RGALLIHGHLDVVPAEPAEWSVHPFSGAIEDGYVWGRGAVDMKDMVGMMIVVARHLRQAAIVPPRDLVFAFVADEEHGGK YGSHWLVDNRPDLFDGITEAIGEVGGFSLTVPRHDGGERRLYLIETAEKGIQWMRLTARGRAGHGSMVHDQNAVTAVCEA VARLGRHQFPLVCTDTVAQFLAVVGEETGLAFDLDSPDLAGTIDKLGPMARMLKAVLHDTANPTMLKAGYKANVVPATAE AVVDCRVLPGRRAAFEAEVDALIGPDVTREWVSDLPSYETTFDGDLVAAMNAAVLAVDPDGRTVPYMLSGGTDAKAFARL GIRCFGFSPLRLPPDLDFTSLFHGVDERVPIDGLRFGTEVLTHLLTHC >Mature_447_residues TDETGASSDHSDDVAQVVSRLIRFDTTNSGEPGTTKGEAECARWVAEQLAEVGYQPEYVESGAPGRGNVFARLAGADSSR GALLIHGHLDVVPAEPAEWSVHPFSGAIEDGYVWGRGAVDMKDMVGMMIVVARHLRQAAIVPPRDLVFAFVADEEHGGKY GSHWLVDNRPDLFDGITEAIGEVGGFSLTVPRHDGGERRLYLIETAEKGIQWMRLTARGRAGHGSMVHDQNAVTAVCEAV ARLGRHQFPLVCTDTVAQFLAVVGEETGLAFDLDSPDLAGTIDKLGPMARMLKAVLHDTANPTMLKAGYKANVVPATAEA VVDCRVLPGRRAAFEAEVDALIGPDVTREWVSDLPSYETTFDGDLVAAMNAAVLAVDPDGRTVPYMLSGGTDAKAFARLG IRCFGFSPLRLPPDLDFTSLFHGVDERVPIDGLRFGTEVLTHLLTHC
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
Organism=Homo sapiens, GI269846968, Length=440, Percent_Identity=26.3636363636364, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4501901, Length=389, Percent_Identity=26.7352185089974, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24649206, Length=416, Percent_Identity=25.2403846153846, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24649202, Length=413, Percent_Identity=24.9394673123487, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24649204, Length=413, Percent_Identity=24.9394673123487, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24649210, Length=414, Percent_Identity=24.8792270531401, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24649212, Length=425, Percent_Identity=25.1764705882353, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24649208, Length=389, Percent_Identity=25.1928020565553, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356353, Length=387, Percent_Identity=24.5478036175711, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010182 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: 3.5.1.16 [C]
Molecular weight: Translated: 48143; Mature: 48012
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETGASSDHSDDVAQVVSRLIRFDTTNSGEPGTTKGEAECARWVAEQLAEVGYQPEYV CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH ESGAPGRGNVFARLAGADSSRGALLIHGHLDVVPAEPAEWSVHPFSGAIEDGYVWGRGAV CCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCEECCCCCCCCCCEEECCCCC DMKDMVGMMIVVARHLRQAAIVPPRDLVFAFVADEEHGGKYGSHWLVDNRPDLFDGITEA CHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHH IGEVGGFSLTVPRHDGGERRLYLIETAEKGIQWMRLTARGRAGHGSMVHDQNAVTAVCEA HHHCCCEEEEECCCCCCCEEEEEEECHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH VARLGRHQFPLVCTDTVAQFLAVVGEETGLAFDLDSPDLAGTIDKLGPMARMLKAVLHDT HHHHCCCCCCEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC ANPTMLKAGYKANVVPATAEAVVDCRVLPGRRAAFEAEVDALIGPDVTREWVSDLPSYET CCCCEEECCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC TFDGDLVAAMNAAVLAVDPDGRTVPYMLSGGTDAKAFARLGIRCFGFSPLRLPPDLDFTS CCCCCHHEECCCEEEEECCCCCEECEEEECCCCHHHHHHHCEEEECCCCCCCCCCCCHHH LFHGVDERVPIDGLRFGTEVLTHLLTHC HHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TDETGASSDHSDDVAQVVSRLIRFDTTNSGEPGTTKGEAECARWVAEQLAEVGYQPEYV CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH ESGAPGRGNVFARLAGADSSRGALLIHGHLDVVPAEPAEWSVHPFSGAIEDGYVWGRGAV CCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCEECCCCCCCCCCEEECCCCC DMKDMVGMMIVVARHLRQAAIVPPRDLVFAFVADEEHGGKYGSHWLVDNRPDLFDGITEA CHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHH IGEVGGFSLTVPRHDGGERRLYLIETAEKGIQWMRLTARGRAGHGSMVHDQNAVTAVCEA HHHCCCEEEEECCCCCCCEEEEEEECHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH VARLGRHQFPLVCTDTVAQFLAVVGEETGLAFDLDSPDLAGTIDKLGPMARMLKAVLHDT HHHHCCCCCCEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC ANPTMLKAGYKANVVPATAEAVVDCRVLPGRRAAFEAEVDALIGPDVTREWVSDLPSYET CCCCEEECCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC TFDGDLVAAMNAAVLAVDPDGRTVPYMLSGGTDAKAFARLGIRCFGFSPLRLPPDLDFTS CCCCCHHEECCCEEEEECCCCCEECEEEECCCCHHHHHHHCEEEECCCCCCCCCCCCHHH LFHGVDERVPIDGLRFGTEVLTHLLTHC HHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Glutathione. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N2-Acetyl-L-ornithine; H2O [C]
Specific reaction: N2-Acetyl-L-ornithine + H2O --> Acetate + Ornithine [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]