Click here to switch to the map view.

The map label for this gene is TB18.6 [C]

Identifier: 121638022

GI number: 121638022

Start: 2379808

End: 2380338

Strand: Reverse

Name: TB18.6 [C]

Synonym: BCG_2157c

Alternate gene names: 121638022

Gene position: 2380338-2379808 (Counterclockwise)

Preceding gene: 121638023

Following gene: 121638019

Centisome position: 54.41

GC content: 65.54

Gene sequence:

>531_bases
ATGACAACTTCACCCGACCCGTATGCCGCGCTGCCCAAGCTGCCGTCCTTCAGCCTGACGTCAACCTCGATCACCGATGG
GCAGCCGCTGGCTACACCCCAGGTCAGCGGGATCATGGGTGCGGGCGGGGCGGATGCCAGTCCGCAGCTGAGGTGGTCGG
GATTTCCCAGCGAGACCCGCAGCTTCGCGGTAACCGTCTACGACCCTGATGCCCCCACCCTGTCCGGGTTCTGGCACTGG
GCGGTGGCCAACCTGCCTGCCAACGTCACCGAGTTGCCCGAGGGTGTCGGCGATGGCCGCGAACTGCCGGGCGGGGCACT
GACATTGGTCAACGACGCCGGTATGCGCCGGTATGTGGGTGCGGCGCCGCCTCCCGGTCATGGGGTGCATCGCTACTACG
TCGCGGTACACGCGGTGAAGGTCGAAAAGCTCGACCTCCCCGAGGACGCGAGTCCTGCATATCTGGGATTCAACCTGTTC
CAGCACGCGATTGCACGAGCGGTCATCTTCGGCACCTACGAGCAGCGTTAG

Upstream 100 bases:

>100_bases
ATGGGTTGCGGTTCGGCACCGAGGTGCTAACGCACTTGCTGACACACTGCTAGTCGAAAACGAGGCTAGTCGCAACGTCG
ATCACACGAGAGGACTGACC

Downstream 100 bases:

>100_bases
CGCTTTAGCTGGGTTGCCGACGTCTTGCCGAGCCGACCGCTTCGTGCAGCGAGCCGAACCCGCCGTCATGCAGCCTGCGG
GCAATGCCTTCATGGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHW
AVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLF
QHAIARAVIFGTYEQR

Sequences:

>Translated_176_residues
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHW
AVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLF
QHAIARAVIFGTYEQR
>Mature_175_residues
TTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHWA
VANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQ
HAIARAVIFGTYEQR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family

Homologues:

Organism=Escherichia coli, GI1786757, Length=163, Percent_Identity=46.6257668711656, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1786990, Length=154, Percent_Identity=46.7532467532467, Blast_Score=133, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2140_MYCTU (P67226)

Other databases:

- EMBL:   BX842578
- EMBL:   AE000516
- PIR:   H70577
- RefSeq:   NP_216656.1
- RefSeq:   NP_336668.1
- ProteinModelPortal:   P67226
- SMR:   P67226
- EnsemblBacteria:   EBMYCT00000002266
- EnsemblBacteria:   EBMYCT00000071673
- GeneID:   888118
- GeneID:   924267
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2198
- KEGG:   mtu:Rv2140c
- TIGR:   MT2198
- TubercuList:   Rv2140c
- GeneTree:   EBGT00050000017552
- HOGENOM:   HBG649023
- OMA:   AYAVTAY
- ProtClustDB:   CLSK791652
- InterPro:   IPR008914
- InterPro:   IPR005247
- Gene3D:   G3DSA:3.90.280.10
- TIGRFAMs:   TIGR00481

Pfam domain/function: PF01161 PBP; SSF49777 PEBP

EC number: NA

Molecular weight: Translated: 18634; Mature: 18503

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCC
SFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVG
EEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCHHHCC
AAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCC
SFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVG
EEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCHHHCC
AAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036