Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is cobK [H]
Identifier: 121637955
GI number: 121637955
Start: 2311143
End: 2311838
Strand: Reverse
Name: cobK [H]
Synonym: BCG_2089c
Alternate gene names: 121637955
Gene position: 2311838-2311143 (Counterclockwise)
Preceding gene: 121637956
Following gene: 121637953
Centisome position: 52.85
GC content: 66.09
Gene sequence:
>696_bases GTGCGCTGGCGAAAGAGTTGCAACCCACACGTTGAGATCGTCAGCTCGCTGGCCGGCCGGGTACCCAACCCTGCCCTGCC GATCGGTCCGGTGCGCATCGGCGGGTTCGGCGGTGTCGAGGGGCTGCGCGGTTGGCTGCGAGAGGAGCGCATCGATGCCG TCGTCGACGCCACCCACCCCTTCGCGGTAACCATCACCGCGCACGCCGCGCAGGTGTGCGGTGAGCTCGGGCTCCCGTAC CTGGTACTGGCTCGCCCGCCGTGGGATCCCGGTACCGCCATCATCGCGGTATCGGACATCGAGGCTGCAGACGTTGTTGC TGAACAAGGTTATTCGCGAGTGTTCCTGACCACCGGACGCTCGGGTATTGCGGCCTTCGCCAACAGCGACGCGTGGTTTT TGATCCGCGTGGTTACCGCGCCCGATGGCACCGCCCTGCCGCGGCGGCACAAACTGGTGCTATCTCGCGGGCCATATGGT TACCACGATGAGTTCGCACTGCTGCGTGAGCAGCGCATCGACGCATTGGTCACCAAGAACAGCGGTGGCAAGATGACCCG AGCGAAGCTGGATGCCGCTGCTGCGCTGGGTATTTCGGTGGTCATGATAGCGCGCCCGCTGCTGCCGGCTGGGGTAGCGG CGGTCGATTCTGTCCACCGGGCCGCCATGTGGGTGGCCGGTCTGCCTAGCCGGTGA
Upstream 100 bases:
>100_bases CGCTGAGGGCTTTACCGACAGCTACCTATATTCGGTGGCACGGCACGGTCGGTATGCACAGTGACCCGGGTGTTGTTGCT CGGCGGCACCGCCGAGGGCC
Downstream 100 bases:
>100_bases GGTCGTCGGGCTCCGCGTCGGCAAGCAGCGCATCGCGCGCTCGAGCGACACGGGATCGGATGGTGCCCACCGGGCAGCCG CACACCGCCGCGGCGTCCGC
Product: cobalt-precorrin-6x reductase
Products: NA
Alternate protein names: Precorrin-6X reductase [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRWRKSCNPHVEIVSSLAGRVPNPALPIGPVRIGGFGGVEGLRGWLREERIDAVVDATHPFAVTITAHAAQVCGELGLPY LVLARPPWDPGTAIIAVSDIEAADVVAEQGYSRVFLTTGRSGIAAFANSDAWFLIRVVTAPDGTALPRRHKLVLSRGPYG YHDEFALLREQRIDALVTKNSGGKMTRAKLDAAAALGISVVMIARPLLPAGVAAVDSVHRAAMWVAGLPSR
Sequences:
>Translated_231_residues MRWRKSCNPHVEIVSSLAGRVPNPALPIGPVRIGGFGGVEGLRGWLREERIDAVVDATHPFAVTITAHAAQVCGELGLPY LVLARPPWDPGTAIIAVSDIEAADVVAEQGYSRVFLTTGRSGIAAFANSDAWFLIRVVTAPDGTALPRRHKLVLSRGPYG YHDEFALLREQRIDALVTKNSGGKMTRAKLDAAAALGISVVMIARPLLPAGVAAVDSVHRAAMWVAGLPSR >Mature_231_residues MRWRKSCNPHVEIVSSLAGRVPNPALPIGPVRIGGFGGVEGLRGWLREERIDAVVDATHPFAVTITAHAAQVCGELGLPY LVLARPPWDPGTAIIAVSDIEAADVVAEQGYSRVFLTTGRSGIAAFANSDAWFLIRVVTAPDGTALPRRHKLVLSRGPYG YHDEFALLREQRIDALVTKNSGGKMTRAKLDAAAALGISVVMIARPLLPAGVAAVDSVHRAAMWVAGLPSR
Specific function: Catalyzes the reduction of the macrocycle of precorrin- 6X into precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: =1.3.1.54 [H]
Molecular weight: Translated: 24581; Mature: 24581
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWRKSCNPHVEIVSSLAGRVPNPALPIGPVRIGGFGGVEGLRGWLREERIDAVVDATHP CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCC FAVTITAHAAQVCGELGLPYLVLARPPWDPGTAIIAVSDIEAADVVAEQGYSRVFLTTGR EEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEECC SGIAAFANSDAWFLIRVVTAPDGTALPRRHKLVLSRGPYGYHDEFALLREQRIDALVTKN CCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEC SGGKMTRAKLDAAAALGISVVMIARPLLPAGVAAVDSVHRAAMWVAGLPSR CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRWRKSCNPHVEIVSSLAGRVPNPALPIGPVRIGGFGGVEGLRGWLREERIDAVVDATHP CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCC FAVTITAHAAQVCGELGLPYLVLARPPWDPGTAIIAVSDIEAADVVAEQGYSRVFLTTGR EEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEECC SGIAAFANSDAWFLIRVVTAPDGTALPRRHKLVLSRGPYGYHDEFALLREQRIDALVTKN CCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEC SGGKMTRAKLDAAAALGISVVMIARPLLPAGVAAVDSVHRAAMWVAGLPSR CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]