Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637945
Identifier: 121637945
GI number: 121637945
Start: 2298826
End: 2300361
Strand: Direct
Name: 121637945
Synonym: BCG_2078
Alternate gene names: NA
Gene position: 2298826-2300361 (Clockwise)
Preceding gene: 121637940
Following gene: 121637948
Centisome position: 52.55
GC content: 67.32
Gene sequence:
>1536_bases GTGGCCACCCCGGTGATCCTTGTCACCGGACACGAGGGCACCGCCGCCGTGACCGCTGACCTGCTGGGCCTGCTCACCGA TCACGGCACTGCGACACTTCGGTCAGTGGCACCAGGATCCGTGCGGCGAGCCGATCCCCGCCCACGGTGTCACCGCCGAG AACAACGACGACGACACCGGGCATCCATGAAATCCGCCATCCATCCCGACCACCACCCCCGTCGTCTTCCACGGTGCCCG GTCCTCCGCCGCGACCAAGTTGTACTGGAAATGATTGTCATTACGATGGTCGGGCGGCCGAGCGGGCCGGGCGAAAGGAA ATGGGATGTGTGGGGCAGCGTGGCACGCGCGGTCACCGGCGGGCATGTACCCGTCAAATCCATCCTCACCGGCGCCCATG CCGACCCGCATTCGTACCAGGCCAGCCCCGCGGACGCCGCCGCGATCGTCGACGCGGAGCTGGTGATTTACAACGGCGGC GGGTACGACCCGTGGGTCGACCAGGTGTTGGCCGGCCATCCTGGTGTCCAGGCGGTCGATGCCTACTCGCTGCTCGGCGC CGTGGGCGACGACGACGCGCCCAACGAACACGTCTTCTACGACCCCAATGTCGCCAAGGCGGTCGCGGCAACGATCGCCG ACCGGTTGGCGGACCTCGACCCGTCCAATTCCGGGAACTATCGAGCGAACGCCGCCGAGTTCAGCCGCGGCGCCGACGCA ATCGCAATTTCCGAACACGCGATCGCCACCACCTATCCCGACGCCGCGGTCATCGCGACCGAACCCGTCGTGCACTACCT GCTGGCGGCAGCCGGCCTGAAAAATCGAACCCCGGCTACCTTCATCGCGGCCAACGAAAACGGCAACGACCCCACCCCGG CCGATATGGCGGCCGTGCTCGACATGATCGCCGGCCGTGAGGTCGCGGCGTTGCTGGTTAACCCGCAGACACCTACCGCG GCGACCGACGAACTGCAGGTGGCCGCCCGGCGGGCAGGAGTGCCAATCACCGAGTTGACCGAGACCTTGCCCAGCGGAAC CGACCGGGACCAGTTTTGCGCTGCTGACCGGCCAGATCGTCGGGGTCGGTCACTCCGGGCTGACCATGCTGACCGTGGTT TGTCTGCTCGTGGTCACCGTGTTGGCGATCTGCTACCGACCGCTCTTGTTTGCCACCGTCGATCCGGAGGTCGCGGCCGC CCGCGGCGTGCCAGTGCGCGCCCTGGGAATTGTGTTCGCCGCACTGATGGGCGTGGTAGCCGCCCAGGCTGTCCAGATCG TCGGGGCACTCCTCGTGATGTCTTTGCTGATCACCCCCGCCGCGGCGGCCGCCCGGGTCGTGGTTGCCCCGGTCGCCGCG ATCGCGACCTCGGTGGTCTTCGCCGAGGTTTCCGCCGTCGGCGGCATCCTGCTGTCGCTGGCGCCTGGAGTCCCGGTGTC GGTGTTCGTGGCCACCATCTCGTTTGTGATCTACCTGATTTGCTGGTTGCTCCGGCGGCGCCGCTAACTAGCCGGTCTCG CTTTCGGCCACTTTGA
Upstream 100 bases:
>100_bases CTTCGAAGCTCGGCTTATTGAAAATCATTTTCGACAACAGCTAGGTGGCACTGTACCGTCGACGTCGCAATAATGAAAAC TGTTATCGATAAGGAGGACG
Downstream 100 bases:
>100_bases GCTCTAGGCCAATGTTGTTCCGCATGCCGCCGCGCAGCTTACTGACGAAGGTGAACAGCTTGCCCTGGATGCCGTAGCGC TTGACGATCGCGTCGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHRASMKSAIHPDHHPRRLPRCP VLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGG GYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTA ATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGR PRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Sequences:
>Translated_511_residues MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHRASMKSAIHPDHHPRRLPRCP VLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGG GYDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTA ATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGR PRRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL >Mature_510_residues ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHRASMKSAIHPDHHPRRLPRCPV LRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGG YDPWVDQVLAGHPGVQAVDAYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADAI AISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVAALLVNPQTPTAA TDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDRRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRP RRASARPGNCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGVG VRGHHLVCDLPDLLVAPAAPLTSRSRFRPL
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54558; Mature: 54427
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR CCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD CCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHH AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA HHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCE IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL EEECCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCCCCCCC RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL CCCCCEEEECCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ATPVILVTGHEGTAAVTADLLGLLTDHGTATLRSVAPGSVRRADPRPRCHRREQRRRHR CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ASMKSAIHPDHHPRRLPRCPVLRRDQVVLEMIVITMVGRPSGPGERKWDVWGSVARAVTG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC GHVPVKSILTGAHADPHSYQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVD CCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHH AYSLLGAVGDDDAPNEHVFYDPNVAKAVAATIADRLADLDPSNSGNYRANAAEFSRGADA HHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCE IAISEHAIATTYPDAAVIATEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVL EEECCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH DMIAGREVAALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPDR HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCCCCCCC RGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPGNCVRRTDGRGS CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC RPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGGLRRGFRRRRHPAVAGAWSPGV CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GVRGHHLVCDLPDLLVAPAAPLTSRSRFRPL CCCCCEEEECCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA