Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637927
Identifier: 121637927
GI number: 121637927
Start: 2270179
End: 2271498
Strand: Reverse
Name: 121637927
Synonym: BCG_2060c
Alternate gene names: NA
Gene position: 2271498-2270179 (Counterclockwise)
Preceding gene: 121637928
Following gene: 121637926
Centisome position: 51.93
GC content: 63.64
Gene sequence:
>1320_bases ATGGTCAATAAGCCGTTCGAGCGGCGCAGTCTGTTACGGGGTGCGGGCGCGCTTACTGCGGCCTCGCTGGCTCCCTGGGC CGCTGGGTGTGCTGCCGATGACGATGACGCGTTGACTTTCTTTTTTGCAGCCAATCCGGACGAGCTCCGTCCCCGGATGC GCGTCGTCAACGAATTCCAGCGGCGCTATCCCGATATCAAGGTACGGGCCCTGTTGTCCGGACCCGGCGTCATGCAGCAG CTCGCAACGTTTTGCGCGGGTGGCAAGTGTCCGGATGTGCTGATGGCATGGGAACTGACCTATGCCGAACTGGCCGACCG GGGGGTGTTGCTTGACCTGAACACGCTATTGGCGCGCGACCAGGCTTTCGCCGCGGAGCTGAAATCGGACAGCATCGGGG CCCTGTATGAGACTTTCACGTTCAACGGAGGCCAGTACGCCTTTCCGGAGCAATGGTCCGGCAACTTCTTGTTCTACAAC AAACAGCTATTCGACGACGCCGGCGTGCCACCGCCGCCCGGTAGCTGGGAACGGCCATGGAGCTTCGCCGAATTCCTGGA TGCCGCCCAGGCGCTTACCAAGCAGGGCCGGTCGGGACGGGACAGGCAATGGGGCTTCGTCAACGCGTGGGTCTCGTTCT ACGCTGCCGGGTTGTTCGCCATGAATAACGGTGTACCGTGGTCGGTTCCGCGGATGAATCCCACCCACCTCAATTTCGAC CACGACGGGTTCCTCGAAGCGGTGCAGTTCTACGCCGACCTGACCAACAAGCACAAGGTGGCCCCCAGCGCTGCTGAGCA GCAGTCGATGTCGACGGCGGACCTGTTTTCTGTGGGCAAGGCCGGGATCGCGTTGGCCGGGCACTGGCGATATCAGACGT TCGACCGTGCCGACGGTCTGGACTTCGACGTCGCCCCACTGCCCATCGGTCCGCGCGGACGAGCCGCCTGTTCAGATATC GGTGTCACCGGGCTGGCCATTGCGGCGACCAGTCGACGCAAGGACCAGGCGTGGGAATTCGTAAAGTTCGCGACCGGCCC GGTGGGGCAGGCATTGATCGGCGAATCCCGCCTGTTCGTGCCGGTGCTGAGATCGGCGATCAACTCGCACGGATTCGCCA ACGCCCACCGCAGGGTAGGCAATCTTGCCGTGCTCAGCGAGGGGCCGGCCTATTCGGAAGGCTTGCCGGTGACCCCGGCC TGGGAGAAGATCGCCGCCCTGATGGACCGCTACTTCGGACCCGTGCTGCGTGGATCCCGGCCGGCGACCTCGCTGACCGG GCTATCACAGGCCGTCGATGAAGTGCTGCGCAATCCATGA
Upstream 100 bases:
>100_bases ATGTTCGCCGACGTGCCGTGGCGCGGCAACCGGATCAATCGGATTCGGTACTTCCCAGCCTGACGGTCGTTGTACCACAG GACCCAAAATCGGGAGCACG
Downstream 100 bases:
>100_bases CACGGCGCAGGGGGCGACGCGCGTGGGCGGGGCGTATGTTCGTCGCGCCGAACTTGGCTGCCGTTGTGGTGTTCATGCTG TTTCCGCTGGGATTCTCGCT
Product: putative sugar-binding lipoprotein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; Sugar Transport System; ABC-Transport Lipoprotein; Transcriptional Regulator; ABC-Type Sugar Transport System; MalE-Like Maltose/Maltodextrin ABC Transporter; ABC-Type Sugar Transport Systems Permease Component; Sugar Uptake ABC Transporter; Abc-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQ LATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYN KQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDI GVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPA WEKIAALMDRYFGPVLRGSRPATSLTGLSQAVDEVLRNP
Sequences:
>Translated_439_residues MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQ LATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYN KQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDI GVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPA WEKIAALMDRYFGPVLRGSRPATSLTGLSQAVDEVLRNP >Mature_439_residues MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQRRYPDIKVRALLSGPGVMQQ LATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARDQAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYN KQLFDDAGVPPPPGSWERPWSFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGLDFDVAPLPIGPRGRAACSDI GVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFVPVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPA WEKIAALMDRYFGPVLRGSRPATSLTGLSQAVDEVLRNP
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47876; Mature: 47876
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ CCCCCHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHH QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW HHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCC SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL CHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEEECCEECCCCCCCCC DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV CCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCHHH PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR HHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PATSLTGLSQAVDEVLRNP CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVNKPFERRSLLRGAGALTAASLAPWAAGCAADDDDALTFFFAANPDELRPRMRVVNEFQ CCCCCHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH RRYPDIKVRALLSGPGVMQQLATFCAGGKCPDVLMAWELTYAELADRGVLLDLNTLLARD HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHH QAFAAELKSDSIGALYETFTFNGGQYAFPEQWSGNFLFYNKQLFDDAGVPPPPGSWERPW HHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCC SFAEFLDAAQALTKQGRSGRDRQWGFVNAWVSFYAAGLFAMNNGVPWSVPRMNPTHLNFD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC HDGFLEAVQFYADLTNKHKVAPSAAEQQSMSTADLFSVGKAGIALAGHWRYQTFDRADGL CHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEEECCEECCCCCCCCC DFDVAPLPIGPRGRAACSDIGVTGLAIAATSRRKDQAWEFVKFATGPVGQALIGESRLFV CCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCHHH PVLRSAINSHGFANAHRRVGNLAVLSEGPAYSEGLPVTPAWEKIAALMDRYFGPVLRGSR HHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PATSLTGLSQAVDEVLRNP CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA