Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637919
Identifier: 121637919
GI number: 121637919
Start: 2263892
End: 2264734
Strand: Reverse
Name: 121637919
Synonym: BCG_2052c
Alternate gene names: NA
Gene position: 2264734-2263892 (Counterclockwise)
Preceding gene: 121637923
Following gene: 121637917
Centisome position: 51.77
GC content: 69.99
Gene sequence:
>843_bases GTGCTGGATCGCTATGGAACCGACGTGCTTGCCGCAGGCGGGCGGCGCCGGCCCCGCTCGGTTGAGCACCCGGTCGAGCT CGGCATGGTCGTCGAAGACGCCGAGACCGGCTACGTCGGTGCGGTGGTCCGAGTCGAATATGGCCGCATCGACTTGGAAG ACCGCTACGGGAAGACCCGCGGGTTTCCGCTGGGCCCCGGGTATCTACTCGACGGCCTGCCGGTGATCCTCACCGCGCCG CGGTGCGCAGCGGCTGCCGGCCCGAGGCGAACGGCATCCGGCTCGGTCGCGGTGCCGGGCGCGCGTGCCCGGGTGGCCCG GGCCAGCCGGATCTATGTCGAGGGCCGACACGACGCTGAACTCATCGCGGCGGTATGGGGAGCGGACCTGCGAATCGAAG GTGTCGTCGTCGAACATCTCGGTGGCGTCGACGACCTGGTGGAGATCGTCGCCAAGTTCCGGCCCGGCCCGCGGCGTCGG CTCGGCGTTCTCGTTGACCATTTGGTCGCGGGGTCGAAAGAGGCGCGCATCGCCGAGGTGGTGCGCCGCGGACCGGGCGG CTCCGACACTTTGGTCGTCGGGCACCCCTACGTCGACATTTGGCAGGCGGTCAAGCCACAACGAGTTGGGCTGGCCGCCT GGCCGAGGGTGCCGCGGCACATCGAGTGGAAGCACGGCGTGTGCGATGCGCTCGGCTGGCCGCACGCCGACCAGGCCGAC ATCGCCGCGGCGTGGCGGCGCATCCGTTCGCAAGTACGCGACTGGACCGACCTAGAGCCGGCGTTGATCGGCCGGGTGGA AGAACTGATCGACTTCGTCACTCAGCCGGCCGGGGACGAATAG
Upstream 100 bases:
>100_bases ACGTTGGCCCGCCGGAAAGTCGACTGGTACAAGCATTTTCCGAGAACCCATGCGGCGCGTCGCGGCGATGACCGGCAGAG AGGCTCCCTAGTATTGCGGC
Downstream 100 bases:
>100_bases CCGCGGAAGATGTCTGCCCAACCGCGCGACACCGTCGCCATCGCCGGATCCGCTCATCGACACATCATCCGCCCGATTCA GCTGCGGTGCTTAGACGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MLDRYGTDVLAAGGRRRPRSVEHPVELGMVVEDAETGYVGAVVRVEYGRIDLEDRYGKTRGFPLGPGYLLDGLPVILTAP RCAAAAGPRRTASGSVAVPGARARVARASRIYVEGRHDAELIAAVWGADLRIEGVVVEHLGGVDDLVEIVAKFRPGPRRR LGVLVDHLVAGSKEARIAEVVRRGPGGSDTLVVGHPYVDIWQAVKPQRVGLAAWPRVPRHIEWKHGVCDALGWPHADQAD IAAAWRRIRSQVRDWTDLEPALIGRVEELIDFVTQPAGDE
Sequences:
>Translated_280_residues MLDRYGTDVLAAGGRRRPRSVEHPVELGMVVEDAETGYVGAVVRVEYGRIDLEDRYGKTRGFPLGPGYLLDGLPVILTAP RCAAAAGPRRTASGSVAVPGARARVARASRIYVEGRHDAELIAAVWGADLRIEGVVVEHLGGVDDLVEIVAKFRPGPRRR LGVLVDHLVAGSKEARIAEVVRRGPGGSDTLVVGHPYVDIWQAVKPQRVGLAAWPRVPRHIEWKHGVCDALGWPHADQAD IAAAWRRIRSQVRDWTDLEPALIGRVEELIDFVTQPAGDE >Mature_280_residues MLDRYGTDVLAAGGRRRPRSVEHPVELGMVVEDAETGYVGAVVRVEYGRIDLEDRYGKTRGFPLGPGYLLDGLPVILTAP RCAAAAGPRRTASGSVAVPGARARVARASRIYVEGRHDAELIAAVWGADLRIEGVVVEHLGGVDDLVEIVAKFRPGPRRR LGVLVDHLVAGSKEARIAEVVRRGPGGSDTLVVGHPYVDIWQAVKPQRVGLAAWPRVPRHIEWKHGVCDALGWPHADQAD IAAAWRRIRSQVRDWTDLEPALIGRVEELIDFVTQPAGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30471; Mature: 30471
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRYGTDVLAAGGRRRPRSVEHPVELGMVVEDAETGYVGAVVRVEYGRIDLEDRYGKTR CCCCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEEEEEEECEEECHHHCCCCC GFPLGPGYLLDGLPVILTAPRCAAAAGPRRTASGSVAVPGARARVARASRIYVEGRHDAE CCCCCCCHHHCCCCEEEECCHHHHCCCCCCCCCCCEECCCHHHHHHHHEEEEEECCCCHH LIAAVWGADLRIEGVVVEHLGGVDDLVEIVAKFRPGPRRRLGVLVDHLVAGSKEARIAEV HHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH VRRGPGGSDTLVVGHPYVDIWQAVKPQRVGLAAWPRVPRHIEWKHGVCDALGWPHADQAD HHCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCHHH IAAAWRRIRSQVRDWTDLEPALIGRVEELIDFVTQPAGDE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLDRYGTDVLAAGGRRRPRSVEHPVELGMVVEDAETGYVGAVVRVEYGRIDLEDRYGKTR CCCCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEEEEEEECEEECHHHCCCCC GFPLGPGYLLDGLPVILTAPRCAAAAGPRRTASGSVAVPGARARVARASRIYVEGRHDAE CCCCCCCHHHCCCCEEEECCHHHHCCCCCCCCCCCEECCCHHHHHHHHEEEEEECCCCHH LIAAVWGADLRIEGVVVEHLGGVDDLVEIVAKFRPGPRRRLGVLVDHLVAGSKEARIAEV HHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH VRRGPGGSDTLVVGHPYVDIWQAVKPQRVGLAAWPRVPRHIEWKHGVCDALGWPHADQAD HHCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCHHH IAAAWRRIRSQVRDWTDLEPALIGRVEELIDFVTQPAGDE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA