Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637877
Identifier: 121637877
GI number: 121637877
Start: 2215958
End: 2216230
Strand: Reverse
Name: 121637877
Synonym: BCG_2010c
Alternate gene names: NA
Gene position: 2216230-2215958 (Counterclockwise)
Preceding gene: 121637878
Following gene: 121637876
Centisome position: 50.66
GC content: 72.53
Gene sequence:
>273_bases GTGGTTACGCATGAGCTATTGGTTAAGGCGGCCGGGGCGGTGCTCACCGGACTGGTCGGGGTGAGCGCCTACGAAACGCT GCGCAAAGCGCTGGGTACGGCGCCCATTCGCCGGGCGTCGGTGACCGTGATGGAGTGGGGCCTGCGCGGAACCCGGCGCG CGGAGGCGGCGGCCGAGTCGGCCCGGCTGACAGTCGCCGACGTCGTTGCCGAGGCTCGCGGGCGCATCGGTGAGGAGGCG CCCCTGCCCGCTGGCGCCAGGGTCGACGAGTGA
Upstream 100 bases:
>100_bases GCCGAGCGCGCCGCGTCCGGGGAGGCGGTCGAGATGACAGGTAGCTGAGCAGCAGACGACACGACTTGTGGTTACAGGAC AAAGCAAAGGAGAACTGACC
Downstream 100 bases:
>100_bases CGACTGTAGTTGACGCCGAGGTCCAGCTGACCGTTGTATCCGATGCAGCCGGGCGGATGCGTGTGCAGGCCACCGGGTTT CAGTTCGACGCGGGACGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAESARLTVADVVAEARGRIGEEA PLPAGARVDE
Sequences:
>Translated_90_residues MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAESARLTVADVVAEARGRIGEEA PLPAGARVDE >Mature_90_residues MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAESARLTVADVVAEARGRIGEEA PLPAGARVDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1993_MYCTU (P64913)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: G70757 - RefSeq: NP_216509.1 - RefSeq: NP_336512.1 - EnsemblBacteria: EBMYCT00000001265 - EnsemblBacteria: EBMYCT00000070374 - GeneID: 885631 - GeneID: 923415 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2049 - KEGG: mtu:Rv1993c - TIGR: MT2049 - TubercuList: Rv1993c - GeneTree: EBGT00050000018078 - HOGENOM: HBG569238 - OMA: PPAIGNH - ProtClustDB: CLSK871989 - InterPro: IPR009963 - ProDom: PD020015
Pfam domain/function: PF07371 DUF1490
EC number: NA
Molecular weight: Translated: 9366; Mature: 9366
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH ARLTVADVVAEARGRIGEEAPLPAGARVDE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH ARLTVADVVAEARGRIGEEAPLPAGARVDE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036