Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637872
Identifier: 121637872
GI number: 121637872
Start: 2211394
End: 2211954
Strand: Reverse
Name: 121637872
Synonym: BCG_2005c
Alternate gene names: NA
Gene position: 2211954-2211394 (Counterclockwise)
Preceding gene: 121637873
Following gene: 121637869
Centisome position: 50.56
GC content: 62.92
Gene sequence:
>561_bases GTGAGCGATGCCCTCGATGAAGGGCTCGTCCAGCGTATCGACGCACGCGGAACAATTGAGTGGTCGGAAACGTGCTACCG GTATACCGGCGCGCACCGTGACGCCTTGTCCGGTGAGGGCGCGCGCAGATTCGGAGGCAGGTGGAATCCGCCGCTGCTCT TTCCGGCGATCTATCTTGCTGATTCCGCCCAAGCCTGCATGGTTGAGGTGGAACGGGCGGCGCAAGCGGCTTCAACGACC GCAGAGAAGATGCTCGAGGCGGCCTACCGACTACACACGATCGACGTCACGGACCTGGCCGTCCTCGATCTGACAACCCC GCAAGCTCGGGAAGCCGTGGGGCTCGAGAACGACGACATCTATGGCGACGACTGGTCAGGGTGCCAGGCGGTCGGACATG CGGCCTGGTTCTTGCACATGCAAGGTGTCCTCGTGCCGGCGGCGGGCGGTGTCGGCCTCGTTGTCACCGCGTATGAACAG CGAACTCGGCCGGGCCAACTACAACTGCGACAAAGCGTCGATCTGACGCCTGCTCTTTACCAAGAACTTCGAGCCACGTA G
Upstream 100 bases:
>100_bases ATCGGTTACTGGAACACCGCAAGCCTGCCGACCTCGTGCGAGACGGCGAGTACCAACGCGTGTTGGCGCTCATCGACGCG ATGGCGGAGGGAGTGTTCGT
Downstream 100 bases:
>100_bases CTGGCCAGCTTGGCGCAGAGAAGGATGCCGCTGTGCCATGGTCATCGTAAGGAGCAACTCGCATCACTTATAAGCCGATA AGCGACATTATGTCAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTT AEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQ RTRPGQLQLRQSVDLTPALYQELRAT
Sequences:
>Translated_186_residues MSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTT AEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQ RTRPGQLQLRQSVDLTPALYQELRAT >Mature_185_residues SDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTTA EKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQR TRPGQLQLRQSVDLTPALYQELRAT
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1989_MYCTU (P64907)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: C70757 - RefSeq: NP_216505.1 - RefSeq: NP_336505.1 - EnsemblBacteria: EBMYCT00000002629 - EnsemblBacteria: EBMYCT00000069738 - GeneID: 885810 - GeneID: 923433 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2043 - KEGG: mtu:Rv1989c - TIGR: MT2043 - TubercuList: Rv1989c - GeneTree: EBGT00050000018624 - HOGENOM: HBG565203 - OMA: YLADSTR - ProtClustDB: CLSK791542 - InterPro: IPR014914 - SMART: SM00953
Pfam domain/function: PF08808 RES
EC number: NA
Molecular weight: Translated: 20281; Mature: 20150
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15b19cf0)-; HASH(0x167a562c)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHC DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEEEEECCCCHHHHHCCCCCCCC YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY CCCCCCHHHHHHHHHHHEECCCEEEECCCCCEEEEEECHHCCCCCCEEEHHCCCCCHHHH QELRAT HHHHCH >Mature Secondary Structure SDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLA CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHC DSAQACMVEVERAAQAASTTAEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEEEEECCCCHHHHHCCCCCCCC YGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQRTRPGQLQLRQSVDLTPALY CCCCCCHHHHHHHHHHHEECCCEEEECCCCCEEEEEECHHCCCCCCEEEHHCCCCCHHHH QELRAT HHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036