Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is acrR [C]
Identifier: 121637869
GI number: 121637869
Start: 2207742
End: 2208962
Strand: Reverse
Name: acrR [C]
Synonym: BCG_2002c
Alternate gene names: 121637869
Gene position: 2208962-2207742 (Counterclockwise)
Preceding gene: 121637872
Following gene: 121637868
Centisome position: 50.5
GC content: 66.34
Gene sequence:
>1221_bases ATGGCATCCGTCGCCCAACCCGTTAGGCGCCGCCCAAAGGACCGGAAGAAGCAGATTTTGGATCAGGCCGTTGGACTGTT CATCGAACGTGGCTTCCATTCGGTCAAATTGGAGGACATTGCCGAGGCGGCCGGGGTGACCGCGCGCGCGTTGTATCGCC ACTACGACAACAAGCAGGCGTTGCTCGCCGAAGCGATCCGAACCGGCCAGGATCAGTACCAGAGCGCGCGTCGTCTCACC GAGGGCGAGACGGAGCCGACGCCGCGGCCGTTGAACGCCGATCTGGAAGACCTGATCGCCGCGGCGGTCGCCTCTCGGGC GTTGACGGTGCTGTGGCAGCGCGAGGCCCGCTACCTCAACGAGGACGACCGCACGGCGGTCCGGCGCCGCATCAACGCGA TCGTCGCCGGCATGCGTGACAGCGTGCTGCTGGAGGTGCCCGATCTGAGTCCACAGCATTCGGAGTTGCGGGCGTGGGCG GTGTCCAGCACTTTGACCAGCCTGGGCCGGCACAGCCTAAGCCTGCCGGGCGAGGAACTGAAAAAGCTTCTCTACCAGGC GTGTATGGCCGCGGCAAGGACGCCTCCCGTCTGCGAATTGCCGCCACTGCCGGCCGGTGATGCCGCACGCGACGAGGCCG ACGTGCTGTTCTCCCGCTACGAGACCCTGCTGGCCGCGGGCGCGCGGCTGTTCCGTGCGCAGGGCTATCCGGCCGTCAAC ACCAGCGAAATCGGCAAGGGAGCCGGCATCGCGGGCCCGGGGCTGTACCGTTCGTTTTCTTCCAAACAGGCCATCCTGGA CGCGCTCATCCGCCGCCTCGACGAGTGGCGCTGCCTGGAGTGCATCCGAGCGCTACGAGCGAATCAGCAAGCGGCACAAC GGTTGCGCGGCCTTGTCCAAGGGCACGTTCGGATCAGCTTGGACGCTCCGGATCTGGTGGCAGTGTCGGTCACCGAACTG TCGCACGCCTCTGTCGAAGTACGCGACGGCTACCTGCGAAATCAGGGCGACCGCGAGGCCGTGTGGATCGACCTCATCGG CAAGCTGGTACCCGCGACCAGTGTCGCCCAGGGGCGACTGCTGGTCGCGGCGGCGATTAGCTTCATCGAAGACGTCGCTC GCACCTGGCATCTCACGCGCTACGCCGGAGTCGCCGACGAGATCAGTGGCCTGGCGCTGGCGATCCTGACCAGCGGGGCA GGTAACCTCTTGCGCGCATAG
Upstream 100 bases:
>100_bases GTGACCGGCGCATTCGAGGTGAAGAATGAGCGGGGTGAAGCTGAGGCGATGCTGCTAGCAGGATTTGTGATTCCGGTGCG CAAGAAGGGGGTTCGAGCCG
Downstream 100 bases:
>100_bases CATGTAGAACAAATAGGTAGTACATTATCGGTGTGAATGAGGTGTCCATACGAACGCTCAACCAGGAGACGTCCAAGGTC CTGGCCCGCGTCAAGCGCGG
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; Regulatory Protein; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Repressor Mce3R; TetR-Family Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQDQYQSARRLT EGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLNEDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWA VSSTLTSLGRHSLSLPGEELKKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQGHVRISLDAPDLVAVSVTEL SHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRLLVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTSGA GNLLRA
Sequences:
>Translated_406_residues MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQDQYQSARRLT EGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLNEDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWA VSSTLTSLGRHSLSLPGEELKKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQGHVRISLDAPDLVAVSVTEL SHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRLLVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTSGA GNLLRA >Mature_405_residues ASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQDQYQSARRLTE GETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLNEDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAV SSTLTSLGRHSLSLPGEELKKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVNT SEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQGHVRISLDAPDLVAVSVTELS HASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRLLVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTSGAG NLLRA
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44342; Mature: 44211
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCHHH LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL CCEEEEECCCCEEEEEHHHHCCCCEEECCCHHCCCCCCHHHHHHHHHHHHCCCHHHCCHH LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTSGAGNLLRA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure ASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCHHH LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL CCEEEEECCCCEEEEEHHHHCCCCEEECCCHHCCCCCCHHHHHHHHHHHHCCCHHHCCHH LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTSGAGNLLRA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA