BacMap

Definition	Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession	NC_008769
Length	4,374,522

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The map label for this gene is yxbG [H]

Identifier: 121637846

GI number: 121637846

Start: 2195824

End: 2196594

Strand: Direct

Name: yxbG [H]

Synonym: BCG_1980

Alternate gene names: 121637846

Gene position: 2195824-2196594 (Clockwise)

Preceding gene: 121637845

Following gene: 121637850

Centisome position: 50.2

GC content: 67.32

Gene sequence:

>771_bases
TTGAACCATCCAGACCTGGCCGGCAAGGTCGCGATCGTTACTGGGGCGGGCGCCGGAATCGGTCTGGCGGTTGCCCGGCG
ACTCGCCGACGAGGGCTGCCATGTGCTGTGCGCGGACATCGATGGTGATGCCGCGGATGCCGCGGCCACCAAAATCGGTT
GTGGCGCAGCGGCCTGCCGGGTTGACGTCAGCGACGAACAACAGATCATCGCCATGGTCGACGCCTGTGTTGCCGCGTTC
GGCGGGGTGGACAAGTTGGTCGCCAACGCCGGTGTCGTTCATCTGGCTTCGCTCATCGACACCACCGTCGAGGACTTCGA
TCGGGTCATCGCGATCAATCTCCGCGGCGCCTGGCTGTGCACCAAGCATGCGGCACCGCGGATGATCGAGCGCGGCGGGG
GAGCCATTGTCAACCTGTCGTCGTTAGCGGGCCAGGTAGCGGTGGGCGGCACCGGCGCATACGGCATGTCGAAGGCCGGC
ATCATCCAGCTCAGCCGCATCACCGCCGCCGAACTGCGCTCGTCGGGCATCCGCTCCAACACGCTGCTGCCCGCATTCGT
CGACACCCCGATGCAGCAGACCGCCATGGCAATGTTCGACGGGGCCCTGGGCGCGGGGGGTGCGCGCTCGATGATTGCCC
GGCTGCAGGGCCGCATGGCCGCACCGGAGGAGATGGCCGGCATCGTGGTGTTCCTGCTGTCCGACGATGCGTCGATGATC
ACCGGCACCACCCAGATCGCCGACGGCGGGACGATTGCCGCGCTGTGGTGA

Upstream 100 bases:

>100_bases
ATCTTGGGGTGTATGCGATCCGACTTTCCGATGATGTGCCAGGATTTGGGCTTGTCATGTTCGGGGCGATCCGAGAAGCC
AGCACGTTGGCGGCCGCAGG

Downstream 100 bases:

>100_bases
TCCCCTCGGGTCAGGCGGTTTCGAAAGATCACGCGAGACATTGCCTGCGACGGCATGCTACATATGTGATTCCGGTGTAT
TCGGGCCTCTGCGCATTGCT

Product: putative short-chain type dehydrogenase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF
GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAG
IIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI
TGTTQIADGGTIAALW

Sequences:

>Translated_256_residues
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF
GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAG
IIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI
TGTTQIADGGTIAALW
>Mature_256_residues
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF
GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAG
IIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI
TGTTQIADGGTIAALW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=37.109375, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=36.9230769230769, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=34.412955465587, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=32.6923076923077, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI66933014, Length=248, Percent_Identity=33.4677419354839, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=32.9365079365079, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=38.0434782608696, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI33667109, Length=217, Percent_Identity=33.6405529953917, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=33.0578512396694, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=28.90625, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=30.5263157894737, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI109715829, Length=249, Percent_Identity=29.3172690763052, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=33.5, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI4758504, Length=201, Percent_Identity=32.8358208955224, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI40254986, Length=209, Percent_Identity=32.0574162679426, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=34.3434343434343, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI142976729, Length=191, Percent_Identity=29.3193717277487, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI59889578, Length=226, Percent_Identity=26.9911504424779, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=29.2490118577075, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=29, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI83715985, Length=193, Percent_Identity=32.1243523316062, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI302344755, Length=107, Percent_Identity=39.2523364485981, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI40807363, Length=236, Percent_Identity=25.8474576271186, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22507405, Length=224, Percent_Identity=30.3571428571429, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=29.0155440414508, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=32.0652173913043, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=36.6533864541833, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=32.3886639676113, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=28.4584980237154, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=32, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=30.0395256916996, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=32.9317269076305, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=31.8897637795276, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=28.6852589641434, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=30.6451612903226, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=28.4046692607004, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=29.0196078431373, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789378, Length=242, Percent_Identity=29.7520661157025, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=28.4916201117318, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=28.7179487179487, Blast_Score=64, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=34.412955465587, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=32.1705426356589, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=30.9236947791165, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=32.6693227091633, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=29.8387096774194, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=29.718875502008, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=33.2089552238806, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=31.5589353612167, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=31.9548872180451, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=30.3703703703704, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=31.6793893129771, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=32.5, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71982365, Length=255, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=30.2788844621514, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=29.6875, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=274, Percent_Identity=28.8321167883212, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=30.7116104868914, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=29.4339622641509, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17558628, Length=254, Percent_Identity=31.8897637795276, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI193203115, Length=202, Percent_Identity=28.2178217821782, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=30.7407407407407, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193203117, Length=201, Percent_Identity=27.8606965174129, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.1787072243346, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=279, Percent_Identity=28.673835125448, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=29.3233082706767, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=29.7397769516729, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=32.4427480916031, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=29.520295202952, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=193, Percent_Identity=25.9067357512953, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=30.3370786516854, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=29.2490118577075, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=28, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=26.4591439688716, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=28.7937743190661, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=28.8770053475936, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320089, Length=209, Percent_Identity=25.8373205741627, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=35.9504132231405, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=37.3983739837398, Blast_Score=131, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=33.0708661417323, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=34.2412451361868, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=31.0077519379845, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=32.520325203252, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21357673, Length=260, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355631, Length=179, Percent_Identity=31.8435754189944, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=30.3643724696356, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24649181, Length=191, Percent_Identity=31.413612565445, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281364892, Length=219, Percent_Identity=26.9406392694064, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI18859837, Length=228, Percent_Identity=32.4561403508772, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17737361, Length=235, Percent_Identity=30.6382978723404, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21358495, Length=249, Percent_Identity=24.4979919678715, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24644337, Length=170, Percent_Identity=32.3529411764706, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24640492, Length=202, Percent_Identity=26.2376237623762, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221510726, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571387, Length=197, Percent_Identity=30.4568527918782, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665243, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221331218, Length=187, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007234, Length=195, Percent_Identity=30.2564102564103, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007236, Length=208, Percent_Identity=25.9615384615385, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=24.8704663212435, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24665247, Length=188, Percent_Identity=29.2553191489362, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221331216, Length=188, Percent_Identity=29.2553191489362, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25835; Mature: 25835

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEE
VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC
EECCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECCEEEE
TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN
ECCCCCHHHHCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCC
TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI
CCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCEE
TGTTQIADGGTIAALW
ECCEEECCCCEEEEEC
>Mature Secondary Structure
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEE
VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC
EECCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECCEEEE
TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN
ECCCCCHHHHCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCC
TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI
CCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCEE
TGTTQIADGGTIAALW
ECCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]