Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is limB [H]
Identifier: 121637841
GI number: 121637841
Start: 2189544
End: 2190653
Strand: Direct
Name: limB [H]
Synonym: BCG_1975
Alternate gene names: 121637841
Gene position: 2189544-2190653 (Clockwise)
Preceding gene: 121637837
Following gene: 121637842
Centisome position: 50.05
GC content: 65.68
Gene sequence:
>1110_bases ATGGAGATCGGAATATTCCTCATGCCGGCCCATCCACCGGAGCGCACCCTCTACGACGCCACCCGGTGGGATCTGGACGT CATCGAGCTGGCCGATCAACTCGGCTACGTGGAGGCCTGGGTCGGCGAACACTTCACCGTGCCGTGGGAGCCGATCTGCG CCCCCGATCTGCTGTTGGCGCAGGCGCTGCTGCGCACCCAACAGATCAAGCTCGCCCCGGGTGCGCACTTGTTGCCCTAC CATCATCCGGTCGAGTTGGCCCACCGGGTGGCCTATTTCGACCACCTCGCCCAGGGTCGGTTCATGCTCGGCGTGGGCGC CAGCGGCATCCCGGGTGACTGGGCGCTGTATGACGTGGACGGCAAGAACGGCGAGCATCGCGAAATGACCCGGGAAGCGC TGGAGATCATGCTGCGCATCTGGACCGAGGACGAGCCCTGGGAGCATCGCGGAAAGTACTGGAACGCCAACGGAATCGCG CCGATGTTCGAGGGTCTGATGAGGCGCCACATCAAGCCGTACCAGAAGCCCCACCCGCCCATCGGCGTCACCGGGTTCAG CGCCGGCTCGGAGACCCTCAAGCTCGCCGGCGAACGGGGTTACATCCCCATGAGTCTGGACCTCAACACCGAATACGTCG CCACCCACTGGGACGCGGTGGAGGAAGGCGCGCTGCGCAGCGGGCGAACCCCGGATCGCCGCGATTGGCGGCTGGTGCGG GAGGTGCTGGTGGCCGAGACCGATGAGCAGGCGTTCCGGTATGCCGTGGACGGCACGATGGGACGCGCCATGCGTGAGTA TGTGCTGCCGACGTTTCGGATGTTCGGCATGACCAAGTTCTACAAACACAATCCGTCGGTGCCCGACGACGAGGTGACAC CGGAGTATCTCGCCGAGAACACCTTCGTGGTCGGCTCGGTGCAGACCGTGGTCGACAAGCTCGAGGCCACCTACGACCAG GTCGGCGGGTTCGGCCACCTGCTGATCCTCGGGTTCGACTACAGCGATAACCCGGGCCCGTGGAAGGAGTCGTTGCGGCT GCTGGCCCACGAGGTCATGCCCAGACTCAACGCCCGCCTCGCCACCAAGCCCGCCACCGCGGTGGTGTAG
Upstream 100 bases:
>100_bases CTTGTGTACAACGAAGTATCTTGGTAGTACTGTGATATACGCAAAGGGCGCCACCGCAGCGCGCCGGGCATCCGACCGGT ACAACCAGGAAGGGTTGACG
Downstream 100 bases:
>100_bases CCATGGCGGTTCGTCAGGTCACCGTCGGCTATTCGGACGGCACGCACAAGACGATGCCGGTGCGGTGCGACCAGACGGTC CTGGATGCCGCCGAGGAACA
Product: putative monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MEIGIFLMPAHPPERTLYDATRWDLDVIELADQLGYVEAWVGEHFTVPWEPICAPDLLLAQALLRTQQIKLAPGAHLLPY HHPVELAHRVAYFDHLAQGRFMLGVGASGIPGDWALYDVDGKNGEHREMTREALEIMLRIWTEDEPWEHRGKYWNANGIA PMFEGLMRRHIKPYQKPHPPIGVTGFSAGSETLKLAGERGYIPMSLDLNTEYVATHWDAVEEGALRSGRTPDRRDWRLVR EVLVAETDEQAFRYAVDGTMGRAMREYVLPTFRMFGMTKFYKHNPSVPDDEVTPEYLAENTFVVGSVQTVVDKLEATYDQ VGGFGHLLILGFDYSDNPGPWKESLRLLAHEVMPRLNARLATKPATAVV
Sequences:
>Translated_369_residues MEIGIFLMPAHPPERTLYDATRWDLDVIELADQLGYVEAWVGEHFTVPWEPICAPDLLLAQALLRTQQIKLAPGAHLLPY HHPVELAHRVAYFDHLAQGRFMLGVGASGIPGDWALYDVDGKNGEHREMTREALEIMLRIWTEDEPWEHRGKYWNANGIA PMFEGLMRRHIKPYQKPHPPIGVTGFSAGSETLKLAGERGYIPMSLDLNTEYVATHWDAVEEGALRSGRTPDRRDWRLVR EVLVAETDEQAFRYAVDGTMGRAMREYVLPTFRMFGMTKFYKHNPSVPDDEVTPEYLAENTFVVGSVQTVVDKLEATYDQ VGGFGHLLILGFDYSDNPGPWKESLRLLAHEVMPRLNARLATKPATAVV >Mature_369_residues MEIGIFLMPAHPPERTLYDATRWDLDVIELADQLGYVEAWVGEHFTVPWEPICAPDLLLAQALLRTQQIKLAPGAHLLPY HHPVELAHRVAYFDHLAQGRFMLGVGASGIPGDWALYDVDGKNGEHREMTREALEIMLRIWTEDEPWEHRGKYWNANGIA PMFEGLMRRHIKPYQKPHPPIGVTGFSAGSETLKLAGERGYIPMSLDLNTEYVATHWDAVEEGALRSGRTPDRRDWRLVR EVLVAETDEQAFRYAVDGTMGRAMREYVLPTFRMFGMTKFYKHNPSVPDDEVTPEYLAENTFVVGSVQTVVDKLEATYDQ VGGFGHLLILGFDYSDNPGPWKESLRLLAHEVMPRLNARLATKPATAVV
Specific function: Acts on both enantiomers of limonene by their NAD- dependent epoxidation at the 1,2 double bond forming limonene-1,2- epoxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.13.107 [H]
Molecular weight: Translated: 41830; Mature: 41830
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGIFLMPAHPPERTLYDATRWDLDVIELADQLGYVEAWVGEHFTVPWEPICAPDLLLA CCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH QALLRTQQIKLAPGAHLLPYHHPVELAHRVAYFDHLAQGRFMLGVGASGIPGDWALYDVD HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECC GKNGEHREMTREALEIMLRIWTEDEPWEHRGKYWNANGIAPMFEGLMRRHIKPYQKPHPP CCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCHHHHHHHHHHCCCCCCCCCC IGVTGFSAGSETLKLAGERGYIPMSLDLNTEYVATHWDAVEEGALRSGRTPDRRDWRLVR CEEECCCCCCHHHEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHH EVLVAETDEQAFRYAVDGTMGRAMREYVLPTFRMFGMTKFYKHNPSVPDDEVTPEYLAEN HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHCC TFVVGSVQTVVDKLEATYDQVGGFGHLLILGFDYSDNPGPWKESLRLLAHEVMPRLNARL CEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH ATKPATAVV CCCCCCCCC >Mature Secondary Structure MEIGIFLMPAHPPERTLYDATRWDLDVIELADQLGYVEAWVGEHFTVPWEPICAPDLLLA CCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH QALLRTQQIKLAPGAHLLPYHHPVELAHRVAYFDHLAQGRFMLGVGASGIPGDWALYDVD HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECC GKNGEHREMTREALEIMLRIWTEDEPWEHRGKYWNANGIAPMFEGLMRRHIKPYQKPHPP CCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCHHHHHHHHHHCCCCCCCCCC IGVTGFSAGSETLKLAGERGYIPMSLDLNTEYVATHWDAVEEGALRSGRTPDRRDWRLVR CEEECCCCCCHHHEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHH EVLVAETDEQAFRYAVDGTMGRAMREYVLPTFRMFGMTKFYKHNPSVPDDEVTPEYLAEN HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHCC TFVVGSVQTVVDKLEATYDQVGGFGHLLILGFDYSDNPGPWKESLRLLAHEVMPRLNARL CEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH ATKPATAVV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA