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The map label for this gene is fadE17 [H]

Identifier: 121637839

GI number: 121637839

Start: 2187119

End: 2188348

Strand: Reverse

Name: fadE17 [H]

Synonym: BCG_1973c

Alternate gene names: 121637839

Gene position: 2188348-2187119 (Counterclockwise)

Preceding gene: 121637840

Following gene: 121637838

Centisome position: 50.02

GC content: 69.84

Gene sequence:

>1230_bases
GTGGACGTCAGCTACCCACCCGAAGCGGAAGCGTTCCGCGACCGGATCCGGGAGTTTGTGGCCGAGCACCTGCCGCCCGG
GTGGCCCGGACCCGGGGCGCTGCCGCCCCACGAGCGGGAAGAGTTCGCCCGGCACTGGCGGCGGGCCCTGGCCGGCGCTG
GCCTGGTCGCGGTGTCCTGGCCGACGGAATACGGGGGTGGTGGCCTGTCCCCGATGGAACAAGTGGTGCTCGCCGAGGAA
TTCGCCCGCGCCGGCGCGCCCGAACGCGCGGAAAACGACCTGCTCGGAATCGACCTGCTGGGCAACACCCTGATCGCCCT
GGGTTCCGAGGCGCAGAAGCGGCATTTCCTGCCGCGCATCCTCAGCGGCGAGCATCGGTGGTGCCAGGGCTTCTCCGAGC
CGGAGGCCGGCTCCGACCTGGCCTCGGTGCGCACCAGGGGGGTGCTCGACGGTGACGAATGGGTGATCAACGGCCACAAA
ATCTGGACGTCGGCCGGCACCACCGCAAACTGGATCTTCCTGCTGGCGCGGACCGATCCCAGCGCTGCGAAACACCGGGG
CCTGTCGTTTCTGCTGGTGCCCATGGACCAGCCCGGCGTCGTGGTCCGGCCGATCGTCAACGCGGCCGGGCACTCCTCGT
TCAGCGAGGTCTTCCTGACCGATGCCCGCACCAGCGCCGGCAATGTCGTCGGCCGGGTCGGCGACGGCTGGTCGACCGCC
ATGACGCTGCTCGGCTTCGAACGCGGATCGCACATCGCCACCGCCGCCATCGATTTTGAGCGGGACCTGCAGCGGCTGTG
CGAGCTGGCCCGTGACCGCGGATTACACACCGATCCACGGGTACGAGACGGCTTGGCGTGGTGCTATGCCCGGGTTCAGA
TCATGCGGTATCGGGGCTACCGTGACCTCACCCTGGCCCTGACCGGACGGCCGCCCGGCGCGGAAGCCGCGATCACGAAG
GTCATCTGGAGCGAATATTTCCGCCGGTACACCGATCTCGCCGTCGAAATCCTGGGGCTCGAGGCGCTGGGCCCGCGGGG
GCCCGGCAACGGCGGTGCGCGGCTGGTCCCGGAGGCGGGTACGCCAAACTCCCCGGCCTGCTGGATGGATGAGCTGCTCT
ACGCACGGGCCGCGACGATCTATGCCGGCAGCTCGCAGATCCAGCGCAACGTGATCGGCGAGCGGCTGCTCGGCCTCCCC
AAGGAGCCGCGGCCCGAAGTGCTCTGCTGA

Upstream 100 bases:

>100_bases
AGCTGTCCTACGGAACGGTCGAGTACGGCCTGGAGGACTGGCGCGCCGCACCGCAGATCCGGCCCGCGATCAAGCAGCGG
CCCTGAGGCCGGGGCGCGCA

Downstream 100 bases:

>100_bases
CGTGGACTTCCGATACAGCACCGAACAAGACGATTTCCGCGCCTCGCTGCGCGGCTTCCTTGGCCGGGGCGCGCCCGTGC
GGGAGATGGCTGCCGCGGAC

Product: putative acyl-CoA dehydrogenase fadE17

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEE
FARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHK
IWTSAGTTANWIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA
MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITK
VIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLP
KEPRPEVLC

Sequences:

>Translated_409_residues
MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEE
FARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHK
IWTSAGTTANWIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA
MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITK
VIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLP
KEPRPEVLC
>Mature_409_residues
MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEE
FARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHK
IWTSAGTTANWIFLLARTDPSAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA
MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITK
VIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLP
KEPRPEVLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=250, Percent_Identity=30.4, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI226958414, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4557231, Length=406, Percent_Identity=26.8472906403941, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI187960098, Length=404, Percent_Identity=27.2277227722772, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI4557233, Length=404, Percent_Identity=27.4752475247525, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4501859, Length=408, Percent_Identity=25.9803921568627, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI21361497, Length=306, Percent_Identity=29.4117647058824, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4557235, Length=311, Percent_Identity=27.9742765273312, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI76496475, Length=311, Percent_Identity=27.9742765273312, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4501857, Length=253, Percent_Identity=26.8774703557312, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI211971008, Length=317, Percent_Identity=26.813880126183, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI48976061, Length=317, Percent_Identity=26.813880126183, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI38505218, Length=225, Percent_Identity=30.6666666666667, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI87081958, Length=346, Percent_Identity=22.8323699421965, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786223, Length=346, Percent_Identity=23.4104046242775, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17538396, Length=408, Percent_Identity=27.9411764705882, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17570075, Length=406, Percent_Identity=27.3399014778325, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17551932, Length=268, Percent_Identity=25, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=27.1767810026385, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=25.9842519685039, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=263, Percent_Identity=25.8555133079848, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=359, Percent_Identity=26.7409470752089, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=407, Percent_Identity=24.8157248157248, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=197, Percent_Identity=30.9644670050761, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=193, Percent_Identity=27.4611398963731, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=144, Percent_Identity=32.6388888888889, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71985184, Length=263, Percent_Identity=26.9961977186312, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17533517, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24646207, Length=401, Percent_Identity=31.4214463840399, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI21355753, Length=255, Percent_Identity=30.5882352941176, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24666513, Length=299, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24660351, Length=354, Percent_Identity=28.8135593220339, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21356377, Length=362, Percent_Identity=27.3480662983425, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281363737, Length=309, Percent_Identity=27.831715210356, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44684; Mature: 44684

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC
PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCHHHHCCCHHHHHHHHHHH
LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP
HCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEECEEEEECCCCCEEEEEEEEECCC
SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA
HHHHHCCCEEEEEECCCCCEEEEHHHHHCCCCCHHHHEEECCCCCCCCEEECCCCCHHHH
MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC
CCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDVSYPPEAEAFRDRIREFVAEHLPPGWPGPGALPPHEREEFARHWRRALAGAGLVAVSW
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC
PTEYGGGGLSPMEQVVLAEEFARAGAPERAENDLLGIDLLGNTLIALGSEAQKRHFLPRI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCHHHHCCCHHHHHHHHHHH
LSGEHRWCQGFSEPEAGSDLASVRTRGVLDGDEWVINGHKIWTSAGTTANWIFLLARTDP
HCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEECEEEEECCCCCEEEEEEEEECCC
SAAKHRGLSFLLVPMDQPGVVVRPIVNAAGHSSFSEVFLTDARTSAGNVVGRVGDGWSTA
HHHHHCCCEEEEEECCCCCEEEEHHHHHCCCCCHHHHEEECCCCCCCCEEECCCCCHHHH
MTLLGFERGSHIATAAIDFERDLQRLCELARDRGLHTDPRVRDGLAWCYARVQIMRYRGY
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RDLTLALTGRPPGAEAAITKVIWSEYFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAG
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
TPNSPACWMDELLYARAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC
CCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]