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The map label for this gene is ureD [H]

Identifier: 121637756

GI number: 121637756

Start: 2101981

End: 2102607

Strand: Direct

Name: ureD [H]

Synonym: BCG_1889

Alternate gene names: 121637756

Gene position: 2101981-2102607 (Clockwise)

Preceding gene: 121637755

Following gene: 121637760

Centisome position: 48.05

GC content: 68.26

Gene sequence:

>627_bases
GTGGTCGCGTCGCCGAATCGGTTGCCGCGCATCGACTGTCGGGGCGGTGTCCAGGCACGCCGAACCGCGCCCGACACGGT
GCACCTGGTGTCGGCGGCCGCGACCCCGCTGGGCGGTGACACCATGAGAATCCGGGTGATCGTGGAACGGGGTGCCCAGC
TACGGCTGCGTAGTGCCGCCGCGACGGTGGCCTTGCCCGGCGTGGATACCCTGACGTCGCATGCTCACTGGGAGATCGAC
GTGACCGGCACCCTGGATGTGGACCTGGAGCCGACGGTCGTCGCCGCCTCAGCCCGGCATCTGTCGCATGCCACCTTGCG
CCTGCACGACGACGGTCGGGTCCGCTTGCGCGAGCGCGTGCAGATTGGCAGATGCAATGAGCGCGAAGGATTTTGGTCGT
CATCGCTGCAGGCCGATCGGCATGGTCGTCCCCTGCTGCGGCACCGGGTGGAACTGGGTGCCGGGTCTTTGGCCGACGAC
GTCATTGCGGCGCCGCGCGCCACTATCAGCGAGCTGCGCTATCCGGCGACGGCATTCACCGACGCCATCGACGCACGGTC
GACCGTTTTGGCGTTGGCGGGTGGCGGAACACTGAGTACCTGGCAGGCTGACCGGTTGCCTGGCTAA

Upstream 100 bases:

>100_bases
CGCCCGACGGTGCTGCAATCGTTGACCGAGGACCCAGCTGCCAGCGATGTCGTGGCCTGGGTTCGTAGTCAACTGGCCGC
CGATGGAGTCTAGTGTTCTG

Downstream 100 bases:

>100_bases
CGCTAGCTGGCCACCTTAGCGCTTGCCGCTGAGCCCTGCGCCTCGGCGGCCAGCTCGGCCAGCTGTTCGAGCCGCGTTCG
CGCAAATGCCTGCTGGTCGG

Product: putative urease accessory protein ureD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSHAHWEID
VTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADD
VIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG

Sequences:

>Translated_208_residues
MVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSHAHWEID
VTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADD
VIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG
>Mature_208_residues
MVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAAATVALPGVDTLTSHAHWEID
VTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERVQIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADD
VIAAPRATISELRYPATAFTDAIDARSTVLALAGGGTLSTWQADRLPG

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 22336; Mature: 22336

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAA
CCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEECCE
ATVALPGVDTLTSHAHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERV
EEEEECCCHHHCCCCEEEEEEEEEEECCCCCEEEEECHHHCEEEEEEECCCCCEEEEEEE
QIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADDVIAAPRATISELRYPATAFT
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCHHHHH
DAIDARSTVLALAGGGTLSTWQADRLPG
HHHCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVASPNRLPRIDCRGGVQARRTAPDTVHLVSAAATPLGGDTMRIRVIVERGAQLRLRSAA
CCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEECCE
ATVALPGVDTLTSHAHWEIDVTGTLDVDLEPTVVAASARHLSHATLRLHDDGRVRLRERV
EEEEECCCHHHCCCCEEEEEEEEEEECCCCCEEEEECHHHCEEEEEEECCCCCEEEEEEE
QIGRCNEREGFWSSSLQADRHGRPLLRHRVELGAGSLADDVIAAPRATISELRYPATAFT
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCHHHHH
DAIDARSTVLALAGGGTLSTWQADRLPG
HHHCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA