Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637605
Identifier: 121637605
GI number: 121637605
Start: 1927963
End: 1928907
Strand: Direct
Name: 121637605
Synonym: BCG_1736
Alternate gene names: NA
Gene position: 1927963-1928907 (Clockwise)
Preceding gene: 121637604
Following gene: 121637606
Centisome position: 44.07
GC content: 64.76
Gene sequence:
>945_bases ATGATCTCGTTGCGTCAACATGCGGTCTCACTGGCTGCGGTCTTCCTGGCGCTGGCCATGGGCGTAGTGTTGGGTTCCGG CTTTTTCTCCGATACTTTGCTGTCCAGCTTGCGTAGCGAGAAGCGGGACCTCTACACGCAGATCGACCGACTCACCGATC AGCGGGATGCACTTCGCGAAAAGCTCAGCGCGGCAGACAATTTCGATATCCAAGTAGGCAGCCGAATAGTGCACGACGCG CTAGTCGGCAAGTCGGTGGTCATCTTCCGCACCCCGGATGCCCACGACGACGATATCGCTGCGGTGTCGAAGATCGTGGG ACAGGCCGGCGGTGCGGTCACCGCAACGGTCTCATTGACCCAGGAGTTCGTCGAAGCCAACTCCGCCGAGAAACTGCGCT CAGTGGTGAACTCGTCCATTCTGCCGGCCGGTAGCCAGTTGAGCACCAAACTCGTTGACCAAGGTTCCCAAGCCGGCGAC CTGCTCGGCATCGCCTTGCTGAGCAACGCCGACCCGGCGGCGCCGACTGTCGAGCAGGCGCAGCGGGACACTGTGCTGGC GGCACTGCGCGAAACCGGCTTCATCACCTATCAGCCCCGCGACCGCATTGGGACGGCAAACGCCACGGTGGTGGTCACCG GCGGAGCGCTCTCTACAGACGCCGGCAACCAGGGGGTCAGCGTGGCTCGGTTCGCCGCGGCGCTGGCGCCGCGCGGGTCT GGCACGCTGCTTGCCGGCCGGGACGGTTCGGCGAACCGACCCGCCGCCGTCGCCGTGACCCGCGCCGATGCCGACATGGC GGCCGAAATCAGCACCGTTGACGACATCGACGCCGAGCCCGGACGAATCACCGTGATCCTTGCCCTGCATGACCTGATCA ACGGAGGCCACGTGGGGCACTACGGCACCGGTCACGGGGCGATGTCAGTCACGGTTTCCCAGTAG
Upstream 100 bases:
>100_bases CACCGACGGCGTGGTCCTGCATTGGATCATCGACTACTGGAACCGATTCTCACTTTGGGTGCAGCACTTGGTCTCCTAGG TTTTCTTGGACGGTGGGTTC
Downstream 100 bases:
>100_bases GCCCGCGTTAGGGCGTGTTCCCCGCGGTGAGGCGCCGTGGATGTTAGGGTGGGTTTCCGTGGGTCGGCAGGCCCAGCAAG GCCAGAGAAATCTTGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQVGSRIVHDA LVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGD LLGIALLSNADPAAPTVEQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYGTGHGAMSVTVSQ
Sequences:
>Translated_314_residues MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQVGSRIVHDA LVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGD LLGIALLSNADPAAPTVEQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYGTGHGAMSVTVSQ >Mature_314_residues MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQVGSRIVHDA LVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGD LLGIALLSNADPAAPTVEQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYGTGHGAMSVTVSQ
Specific function: Likely involved in transport processes across the outer membrane. Appears to be specific for mycolic acid-containing membranes
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OMP1_MYCBO (P64884)
Other databases:
- EMBL: BX248339 - RefSeq: NP_855377.1 - EnsemblBacteria: EBMYCT00000015853 - GeneID: 1092674 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1724 - GeneTree: EBGT00050000017064 - HOGENOM: HBG580092 - OMA: SGLRDDK - ProtClustDB: CLSK791334 - BioCyc: MBOV233413:MB1724-MONOMER - InterPro: IPR021522
Pfam domain/function: PF11382 DUF3186
EC number: NA
Molecular weight: Translated: 32392; Mature: 32392
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT HHHCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHHH QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHH QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHCCCCC GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH CCEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEHHHHCCCCCCC YGTGHGAMSVTVSQ CCCCCCEEEEEECC >Mature Secondary Structure MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT HHHCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHHH QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHH QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHCCCCC GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH CCEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEHHHHCCCCCCC YGTGHGAMSVTVSQ CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972