Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637595
Identifier: 121637595
GI number: 121637595
Start: 1918197
End: 1918808
Strand: Direct
Name: 121637595
Synonym: BCG_1726
Alternate gene names: NA
Gene position: 1918197-1918808 (Clockwise)
Preceding gene: 121637591
Following gene: 121637596
Centisome position: 43.85
GC content: 70.59
Gene sequence:
>612_bases ATGAACGCTGAGGAACTGGCGATCGACCCGGTCGCGGCCGCGCATCGGCTGCTCGGCGCAACTATTGCCGGACGGGGTGT GCGTGCGATGGTGGTCGAGGTCGAGGCGTATGGCGGGGTGCCCGACGGTCCCTGGCCGGACGCCGCGGCGCACTCTTACC GCGGCCGCAATGGCCGCAACGACGTCATGTTCGGGCCCCCGGGGCGGCTTTACACCTACCGCAGCCATGGGATCCATGTC TGTGCCAACGTCGCGTGCGGGCCCGATGGCACGGCTGCCGCTGTGCTACTTAGGGCCGCCGCCATCGAGGACGGCGCCGA GCTCGCCACGTCTCGGCGCGGGCAGACGGTGCGCGCTGTCGCACTGGCGCGCGGCCCGGGAAACCTCTGCGCTGCCCTCG GAATCACCATGGCCGACAACGGGATTGACTTGTTTGATCCGTCCAGTCCGGTGCGGCTGAGGCTCAACGACACGCACCGT GCCAGGTCGGGGCCGCGCGTTGGGGTCAGTCAAGCCGCTGACCGGCCGTGGCGATTGTGGCTCACGGGTCGACCGGAGGT GTCGGCCTACCGGCGAAGCTCGCGGGCACCGGCCCGGGGAGCCAGCGACTAG
Upstream 100 bases:
>100_bases GGCACCGTCGCGAAGTAATTCATCACTTGATGAAATCATCATGTGATGAATATCCGCCAGTCGTGCGGGTTTGTCAAGGG CCGGTGCACAATCGTCTCTG
Downstream 100 bases:
>100_bases AGTCTTGCGGGATGTCTGGCATGATCCTCGATGAGCTCAGCTGGCGCGGGTTGATCGCGCAGTCGACCGACCTCGACACG TTGGCCGCCGAAGCACAGCG
Product: 3-methyladenine DNA glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNAEELAIDPVAAAHRLLGATIAGRGVRAMVVEVEAYGGVPDGPWPDAAAHSYRGRNGRNDVMFGPPGRLYTYRSHGIHV CANVACGPDGTAAAVLLRAAAIEDGAELATSRRGQTVRAVALARGPGNLCAALGITMADNGIDLFDPSSPVRLRLNDTHR ARSGPRVGVSQAADRPWRLWLTGRPEVSAYRRSSRAPARGASD
Sequences:
>Translated_203_residues MNAEELAIDPVAAAHRLLGATIAGRGVRAMVVEVEAYGGVPDGPWPDAAAHSYRGRNGRNDVMFGPPGRLYTYRSHGIHV CANVACGPDGTAAAVLLRAAAIEDGAELATSRRGQTVRAVALARGPGNLCAALGITMADNGIDLFDPSSPVRLRLNDTHR ARSGPRVGVSQAADRPWRLWLTGRPEVSAYRRSSRAPARGASD >Mature_203_residues MNAEELAIDPVAAAHRLLGATIAGRGVRAMVVEVEAYGGVPDGPWPDAAAHSYRGRNGRNDVMFGPPGRLYTYRSHGIHV CANVACGPDGTAAAVLLRAAAIEDGAELATSRRGQTVRAVALARGPGNLCAALGITMADNGIDLFDPSSPVRLRLNDTHR ARSGPRVGVSQAADRPWRLWLTGRPEVSAYRRSSRAPARGASD
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family
Homologues:
Organism=Homo sapiens, GI62632769, Length=208, Percent_Identity=32.6923076923077, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI62632771, Length=208, Percent_Identity=32.6923076923077, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI62632765, Length=190, Percent_Identity=33.6842105263158, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 3MGH_MYCBO (P65413)
Other databases:
- EMBL: BX248339 - RefSeq: NP_855367.1 - ProteinModelPortal: P65413 - SMR: P65413 - EnsemblBacteria: EBMYCT00000014347 - GeneID: 1092663 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1714 - GeneTree: EBGT00050000017493 - HOGENOM: HBG664239 - OMA: LCSGPGK - ProtClustDB: PRK00802 - BioCyc: MBOV233413:MB1714-MONOMER - HAMAP: MF_00527 - InterPro: IPR011034 - InterPro: IPR003180 - Gene3D: G3DSA:3.10.300.10 - PANTHER: PTHR10429 - TIGRFAMs: TIGR00567
Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like
EC number: 3.2.2.-
Molecular weight: Translated: 21340; Mature: 21340
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAEELAIDPVAAAHRLLGATIAGRGVRAMVVEVEAYGGVPDGPWPDAAAHSYRGRNGRN CCCCHHEECHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCC DVMFGPPGRLYTYRSHGIHVCANVACGPDGTAAAVLLRAAAIEDGAELATSRRGQTVRAV CEEECCCCCEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEE ALARGPGNLCAALGITMADNGIDLFDPSSPVRLRLNDTHRARSGPRVGVSQAADRPWRLW EEECCCCCEEEHEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEE LTGRPEVSAYRRSSRAPARGASD EECCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNAEELAIDPVAAAHRLLGATIAGRGVRAMVVEVEAYGGVPDGPWPDAAAHSYRGRNGRN CCCCHHEECHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCC DVMFGPPGRLYTYRSHGIHVCANVACGPDGTAAAVLLRAAAIEDGAELATSRRGQTVRAV CEEECCCCCEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEE ALARGPGNLCAALGITMADNGIDLFDPSSPVRLRLNDTHRARSGPRVGVSQAADRPWRLW EEECCCCCEEEHEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEE LTGRPEVSAYRRSSRAPARGASD EECCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972