Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yebQ [C]
Identifier: 121637541
GI number: 121637541
Start: 1844415
End: 1845830
Strand: Direct
Name: yebQ [C]
Synonym: BCG_1672
Alternate gene names: 121637541
Gene position: 1844415-1845830 (Clockwise)
Preceding gene: 121637540
Following gene: 121637543
Centisome position: 42.16
GC content: 67.09
Gene sequence:
>1416_bases GTGACCGAAACAGCGAGCGAGACCGGCAGCTGGCGTCAGCTACTGAGCAGGTATCTGGGCACCTCCATAGTGCTGGCCGG TGGCGTCGCGCTGTACGCCACCAACGAGTTTCTGACAATCAGCCTGCTGCCGAGCACAATCGCCGACATCGGGGGTAGCC GGCTGTACGCCTGGGTGACAACCCTGTATCTGGTCGGGTCGGTGGTGGCGGCGACCACCGTCAATACGATGTTGCTGCGC GTCGGGGCGCGCTCGTCGTATCTGATGGGGTTGGCCGTCTTCGGTCTGGCCAGCCTGGTATGTGCGGCGGCGCCGAGCAT GCAGATTCTGGTGGCCGGGCGTACCTTGCAAGGAATAGCCGGTGGGCTGCTGGCCGGCCTAGGCTACGCGCTGATCAACT CGACCTTGCCCAAGTCGCTGTGGACCCGTGGCTCAGCACTGGTGTCGGCGATGTGGGGGGTCGCGACGCTGATCGGACCG GCGACCGGAGGCCTTTTCGCGCAGCTCGGGCTGTGGCGATGGGCGTTCGGCGTGATGACGTTGCTGACCGCGTTGATGGC CATGTTGGTGCCGGTCGCGCTCGGTGCCGGGCGGGTCGGCCCGGGCGGCGAGACGCCGGTGGGCAGCACACACAAGGTGC CGGTGTGGTCGCTATTGCTGATGGGGGCCGCCGCACTGGCGATCAGCGTCGCCGCGCTTCCGAACTACCTCGTCCAGACG GCCGGGCTGCTAGCCGCCGCCGCGCTGCTGGTTGCGGTGTTTGTGGTAGTCGACTGGCGGATACACGCAGCGGTGTTGCC GCCCAGCGTATTTGGCTCCGGACCGTTGAAATGGATTTACCTGACCATGTCGGTGCAGATGATTGCGGCAATGGTCGATA CCTACGTGCCGCTGTTCGGTCAGCGACTGGGACACCTGACCCCGGTGGCAGCCGGGTTCTTGGGTGCCGCGCTGGCGGTG GGCTGGACGGTCGGTGAGGTCGCCAGCGCCTCGTTGAACAGTGCACGAGTTATCGGGCATGTCGTGGCAGCCGCACCGCT GGTGATGGCGTCGGGGTTGGCGCTAGGCGCCGTCACCCAGCGCGCCGATGCGCCGGTGGGGATCATCGCGCTGTGGGCGC TGGCGCTGCTGATCATCGGGACCGGCATCGGGATCGCCTGGCCGCATCTAACGGTGCGCGCTATGGATTCTGTCGCCGAC CCGGCCGAGAGCAGCGCGGCGGCCGCGGCGATCAATGTCGTACAGCTGATCTCCGGTGCTTTCGGCGCCGGGCTGGCCGG TGTGGTGGTCAACACTGCCAAGGGCGGCGAAGTGGCGGCGGCTCGTGGGCTATACATGGCATTTACGGTGCTGGCCGCCG CTGGTGTCATCGCCTCCTACCAGGCCACGCACCGCGACCGGCGCTTACCGCGTTGA
Upstream 100 bases:
>100_bases CGGCCGCGCGCGACCTGCAGTTCGAGCTGGCGGCCCGGTTCCGCGACGAGATCGCCGACCTCAAGCGGGAGCTGCGGGGG ATGGACGCGGCCGGCCTGAA
Downstream 100 bases:
>100_bases CTTGACCACCTGCGAGTAGTGGAACTGCCAGCGCTCGACGATGCGGAAGCCGAGGTAGCTCGGGAACCGGTATACGGGCG TGCGCCCGAAGCCTGTTCCC
Product: putative drug efflux membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MTETASETGSWRQLLSRYLGTSIVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVTTLYLVGSVVAATTVNTMLLR VGARSSYLMGLAVFGLASLVCAAAPSMQILVAGRTLQGIAGGLLAGLGYALINSTLPKSLWTRGSALVSAMWGVATLIGP ATGGLFAQLGLWRWAFGVMTLLTALMAMLVPVALGAGRVGPGGETPVGSTHKVPVWSLLLMGAAALAISVAALPNYLVQT AGLLAAAALLVAVFVVVDWRIHAAVLPPSVFGSGPLKWIYLTMSVQMIAAMVDTYVPLFGQRLGHLTPVAAGFLGAALAV GWTVGEVASASLNSARVIGHVVAAAPLVMASGLALGAVTQRADAPVGIIALWALALLIIGTGIGIAWPHLTVRAMDSVAD PAESSAAAAAINVVQLISGAFGAGLAGVVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR
Sequences:
>Translated_471_residues MTETASETGSWRQLLSRYLGTSIVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVTTLYLVGSVVAATTVNTMLLR VGARSSYLMGLAVFGLASLVCAAAPSMQILVAGRTLQGIAGGLLAGLGYALINSTLPKSLWTRGSALVSAMWGVATLIGP ATGGLFAQLGLWRWAFGVMTLLTALMAMLVPVALGAGRVGPGGETPVGSTHKVPVWSLLLMGAAALAISVAALPNYLVQT AGLLAAAALLVAVFVVVDWRIHAAVLPPSVFGSGPLKWIYLTMSVQMIAAMVDTYVPLFGQRLGHLTPVAAGFLGAALAV GWTVGEVASASLNSARVIGHVVAAAPLVMASGLALGAVTQRADAPVGIIALWALALLIIGTGIGIAWPHLTVRAMDSVAD PAESSAAAAAINVVQLISGAFGAGLAGVVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR >Mature_470_residues TETASETGSWRQLLSRYLGTSIVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVTTLYLVGSVVAATTVNTMLLRV GARSSYLMGLAVFGLASLVCAAAPSMQILVAGRTLQGIAGGLLAGLGYALINSTLPKSLWTRGSALVSAMWGVATLIGPA TGGLFAQLGLWRWAFGVMTLLTALMAMLVPVALGAGRVGPGGETPVGSTHKVPVWSLLLMGAAALAISVAALPNYLVQTA GLLAAAALLVAVFVVVDWRIHAAVLPPSVFGSGPLKWIYLTMSVQMIAAMVDTYVPLFGQRLGHLTPVAAGFLGAALAVG WTVGEVASASLNSARVIGHVVAAAPLVMASGLALGAVTQRADAPVGIIALWALALLIIGTGIGIAWPHLTVRAMDSVADP AESSAAAAAINVVQLISGAFGAGLAGVVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR
Specific function: Could be involved in fluoroquinolones efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=134, Percent_Identity=30.5970149253731, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47812; Mature: 47681
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETASETGSWRQLLSRYLGTSIVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVT CCCCCCCCCHHHHHHHHHHCCHHHHHCCEEEEEECCEEEEEECHHHHHHCCCCHHHHHHH TLYLVGSVVAATTVNTMLLRVGARSSYLMGLAVFGLASLVCAAAPSMQILVAGRTLQGIA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH GGLLAGLGYALINSTLPKSLWTRGSALVSAMWGVATLIGPATGGLFAQLGLWRWAFGVMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLTALMAMLVPVALGAGRVGPGGETPVGSTHKVPVWSLLLMGAAALAISVAALPNYLVQT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLLAAAALLVAVFVVVDWRIHAAVLPPSVFGSGPLKWIYLTMSVQMIAAMVDTYVPLFG HHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH QRLGHLTPVAAGFLGAALAVGWTVGEVASASLNSARVIGHVVAAAPLVMASGLALGAVTQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH RADAPVGIIALWALALLIIGTGIGIAWPHLTVRAMDSVADPAESSAAAAAINVVQLISGA HCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FGAGLAGVVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR HCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TETASETGSWRQLLSRYLGTSIVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVT CCCCCCCCHHHHHHHHHHCCHHHHHCCEEEEEECCEEEEEECHHHHHHCCCCHHHHHHH TLYLVGSVVAATTVNTMLLRVGARSSYLMGLAVFGLASLVCAAAPSMQILVAGRTLQGIA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH GGLLAGLGYALINSTLPKSLWTRGSALVSAMWGVATLIGPATGGLFAQLGLWRWAFGVMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLTALMAMLVPVALGAGRVGPGGETPVGSTHKVPVWSLLLMGAAALAISVAALPNYLVQT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLLAAAALLVAVFVVVDWRIHAAVLPPSVFGSGPLKWIYLTMSVQMIAAMVDTYVPLFG HHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH QRLGHLTPVAAGFLGAALAVGWTVGEVASASLNSARVIGHVVAAAPLVMASGLALGAVTQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH RADAPVGIIALWALALLIIGTGIGIAWPHLTVRAMDSVADPAESSAAAAAINVVQLISGA HCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FGAGLAGVVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR HCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]