Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is pykA [H]
Identifier: 121637524
GI number: 121637524
Start: 1821436
End: 1822854
Strand: Direct
Name: pykA [H]
Synonym: BCG_1655
Alternate gene names: 121637524
Gene position: 1821436-1822854 (Clockwise)
Preceding gene: 121637523
Following gene: 121637525
Centisome position: 41.64
GC content: 66.31
Gene sequence:
>1419_bases GTGACGAGACGCGGGAAAATCGTCTGCACTCTCGGGCCGGCCACCCAGCGGGACGACCTGGTCAGAGCGCTGGTCGAGGC CGGAATGGACGTCGCCCGAATGAACTTCAGCCACGGCGACTACGACGATCACAAGGTCGCCTATGAGCGGGTCCGGGTAG CCTCCGACGCCACCGGGCGCGCGGTCGGCGTGCTCGCCGACCTGCAGGGCCCGAAGATCAGGTTGGGACGCTTCGCCTCC GGGGCCACCCACTGGGCCGAAGGCGAAACCGTCCGGATCACCGTGGGCGCCTGCGAGGGCAGCCACGATCGGGTGTCCAC CACCTACAAGCGGCTAGCCCAGGACGCGGTGGCCGGTGACCGGGTGCTGGTCGACGACGGCAAAGTCGCATTGGTGGTCG ACGCCGTCGAGGGCGACGACGTGGTCTGCACCGTCGTCGAAGGCGGCCCGGTCAGCGACAACAAGGGCATCTCGTTGCCC GGAATGAACGTGACCGCGCCGGCCCTGTCGGAGAAGGACATCGAGGATCTCACGTTCGCGCTGAACCTCGGCGTCGACAT GGTGGCGCTTTCCTTCGTCCGCTCCCCGGCCGATGTCGAACTGGTCCACGAGGTGATGGATCGGATCGGGCGACGGGTGC CGGTGATCGCCAAGCTGGAGAAGCCGGAAGCCATCGACAATCTCGAAGCGATCGTGCTGGCGTTCGACGCCGTCATGGTC GCTCGGGGCGACCTAGGTGTTGAGCTGCCGCTCGAAGAGGTCCCGCTGGTACAGAAGCGAGCCATCCAGATGGCCCGGGA GAACGCCAAGCCGGTCATTGTGGCGACCCAGATGCTCGACTCGATGATCGAGAACTCGCGGCCGACCCGAGCTGAGGCCT CCGACGTCGCCAACGCGGTGCTCGATGGCGCCGACGCGCTGATGCTGTCCGGGGAAACCTCGGTAGGGAAGTACCCCCTT GCTGCGGTCCGGACAATGTCGCGCATCATCTGCGCGGTCGAGGAGAACTCCACGGCCGCACCGCCGTTGACACACATTCC CCGGACCAAGCGTGGGGTCATCTCGTATGCGGCCCGTGACATCGGCGAACGACTCGACGCCAAGGCCTTGGTGGCCTTCA CTCAGTCCGGTGATACCGTGCGGCGACTGGCCCGCCTGCATACCCCGCTGCCGCTGCTGGCCTTCACCGCGTGGCCCGAG GTGCGCAGCCAACTGGCGATGACCTGGGGCACCGAGACGTTCATCGTGCCGAAGATGCAGTCCACCGATGGCATGATCCG CCAGGTCGACAAATCGCTGCTCGAACTCGCCCGCTACAAGCGTGGTGACTTGGTGGTCATCGTCGCGGGTGCGCCGCCAG GCACAGTGGGTTCGACCAACCTGATCCACGTGCACCGGATCGGGGAAGATGACGTCTAG
Upstream 100 bases:
>100_bases TACCCGCGGTCTGGTTGGCTGGGCTGCCCGCGGTGGTGTTGACCGGTGTGCCGACCCGGCGGTGCCGGCCCTACCGCCGT CGCGACTATGCTGAGTCGTC
Downstream 100 bases:
>100_bases CCGGGTCGTGCCGGACGGTAAACCCATGTCCGACTTCGATGAACTACTGGCGGTATTGGACCTCAACGCCGTCGCAAGCG ACCTGTTCACCGGATCCCAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTRRGKIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGRAVGVLADLQGPKIRLGRFAS GATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGDRVLVDDGKVALVVDAVEGDDVVCTVVEGGPVSDNKGISLP GMNVTAPALSEKDIEDLTFALNLGVDMVALSFVRSPADVELVHEVMDRIGRRVPVIAKLEKPEAIDNLEAIVLAFDAVMV ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADALMLSGETSVGKYPL AAVRTMSRIICAVEENSTAAPPLTHIPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPE VRSQLAMTWGTETFIVPKMQSTDGMIRQVDKSLLELARYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV
Sequences:
>Translated_472_residues MTRRGKIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGRAVGVLADLQGPKIRLGRFAS GATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGDRVLVDDGKVALVVDAVEGDDVVCTVVEGGPVSDNKGISLP GMNVTAPALSEKDIEDLTFALNLGVDMVALSFVRSPADVELVHEVMDRIGRRVPVIAKLEKPEAIDNLEAIVLAFDAVMV ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADALMLSGETSVGKYPL AAVRTMSRIICAVEENSTAAPPLTHIPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPE VRSQLAMTWGTETFIVPKMQSTDGMIRQVDKSLLELARYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV >Mature_471_residues TRRGKIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGRAVGVLADLQGPKIRLGRFASG ATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGDRVLVDDGKVALVVDAVEGDDVVCTVVEGGPVSDNKGISLPG MNVTAPALSEKDIEDLTFALNLGVDMVALSFVRSPADVELVHEVMDRIGRRVPVIAKLEKPEAIDNLEAIVLAFDAVMVA RGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADALMLSGETSVGKYPLA AVRTMSRIICAVEENSTAAPPLTHIPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPEV RSQLAMTWGTETFIVPKMQSTDGMIRQVDKSLLELARYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=36.8098159509202, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=36.4197530864198, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=36.4197530864198, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI10835121, Length=492, Percent_Identity=35.5691056910569, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=35.5691056910569, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=37.2822299651568, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=37.2822299651568, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=34.8936170212766, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=34.8936170212766, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=35.1851851851852, Blast_Score=129, Evalue=9e-30, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=40, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=38.655462184874, Blast_Score=287, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17544584, Length=490, Percent_Identity=35.3061224489796, Blast_Score=287, Evalue=7e-78, Organism=Caenorhabditis elegans, GI17506829, Length=485, Percent_Identity=36.0824742268041, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=36.0824742268041, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71984413, Length=485, Percent_Identity=36.0824742268041, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17506831, Length=337, Percent_Identity=43.026706231454, Blast_Score=268, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=34.9794238683128, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=33.6755646817248, Blast_Score=241, Evalue=2e-64, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=36.530612244898, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=36.530612244898, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI24648966, Length=460, Percent_Identity=34.7826086956522, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24581235, Length=405, Percent_Identity=29.3827160493827, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24646914, Length=288, Percent_Identity=34.0277777777778, Blast_Score=151, Evalue=1e-36,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50700; Mature: 50569
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGKIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGR CCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCC AVGVLADLQGPKIRLGRFASGATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGD EEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC RVLVDDGKVALVVDAVEGDDVVCTVVEGGPVSDNKGISLPGMNVTAPALSEKDIEDLTFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEE LNLGVDMVALSFVRSPADVELVHEVMDRIGRRVPVIAKLEKPEAIDNLEAIVLAFDAVMV ECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHE ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAV ECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADALMLSGETSVGKYPLAAVRTMSRIICAVEENSTAAPPLTHIPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH IGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPKMQ HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHEECCHHHHHHHHHCCCCCEEEEECCC STDGMIRQVDKSLLELARYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TRRGKIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGR CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCC AVGVLADLQGPKIRLGRFASGATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGD EEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC RVLVDDGKVALVVDAVEGDDVVCTVVEGGPVSDNKGISLPGMNVTAPALSEKDIEDLTFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEE LNLGVDMVALSFVRSPADVELVHEVMDRIGRRVPVIAKLEKPEAIDNLEAIVLAFDAVMV ECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHE ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAV ECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADALMLSGETSVGKYPLAAVRTMSRIICAVEENSTAAPPLTHIPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH IGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPKMQ HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHEECCHHHHHHHHHCCCCCEEEEECCC STDGMIRQVDKSLLELARYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA