Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637522
Identifier: 121637522
GI number: 121637522
Start: 1820500
End: 1820940
Strand: Direct
Name: 121637522
Synonym: BCG_1653
Alternate gene names: NA
Gene position: 1820500-1820940 (Clockwise)
Preceding gene: 121637521
Following gene: 121637523
Centisome position: 41.62
GC content: 63.72
Gene sequence:
>441_bases ATGGGCCTACGGCCGGCACGGGTCGTGCGCCCGGCTCGATCTGGCATGCTGAAAGGCGTGACCGATCCCCTGCAGCACGG TGCCTTCGAGCCGGGCTGGCAATCCGCACCACCCGGATATCCACCGCCTTATCCGCAATATCCGGGGCCTGGCTCTTACT TTGACCCGTTCGCGCCATATGGTCGCCATCCGGTCACCGGCCAACCATTTTCCGACAAATCGAAGACTGTTGCCGGCCTG TTGCAGTTGCTTGGACTGTTCGGCATCGCCGGGATCGGGCGAATCTACCTGGGCCATACCGGCCTGGGCATCGCGCAGCT GCTGGTGGGCTGGGTGACGTGCGGTTTGGGCGCCGTCATCTGGGGCGTCATTGACGCCCTGCTGATATTGACCGACAAAG TCGGCGACCCTTGGGGTCGTCCCTTGCGCGATGGAAGCTAG
Upstream 100 bases:
>100_bases ACCGGTTGCCCGCCTCACAACGACATGCTGAGGCGCACACGGTCGCTCGCAGCCGGGCACAACGAACACCCCTGCTCTGC CGCGCCGATGTTGGGAACGC
Downstream 100 bases:
>100_bases CGGGCGTCAACGTCGCTACGCCGCGGCCGGTTCGGTCGTGCTATTGGCCGGCGCGCTTGGCTACATCGGACTTGTCGACC CGCACAACTCGAATTCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; TM2 Domain Containing Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPPYPQYPGPGSYFDPFAPYGRHPVTGQPFSDKSKTVAGL LQLLGLFGIAGIGRIYLGHTGLGIAQLLVGWVTCGLGAVIWGVIDALLILTDKVGDPWGRPLRDGS
Sequences:
>Translated_146_residues MGLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPPYPQYPGPGSYFDPFAPYGRHPVTGQPFSDKSKTVAGL LQLLGLFGIAGIGRIYLGHTGLGIAQLLVGWVTCGLGAVIWGVIDALLILTDKVGDPWGRPLRDGS >Mature_145_residues GLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPPYPQYPGPGSYFDPFAPYGRHPVTGQPFSDKSKTVAGLL QLLGLFGIAGIGRIYLGHTGLGIAQLLVGWVTCGLGAVIWGVIDALLILTDKVGDPWGRPLRDGS
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15442; Mature: 15311
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPPYPQYPGPGSYFDPFAPY CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRHPVTGQPFSDKSKTVAGLLQLLGLFGIAGIGRIYLGHTGLGIAQLLVGWVTCGLGAVI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WGVIDALLILTDKVGDPWGRPLRDGS HHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GLRPARVVRPARSGMLKGVTDPLQHGAFEPGWQSAPPGYPPPYPQYPGPGSYFDPFAPY CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRHPVTGQPFSDKSKTVAGLLQLLGLFGIAGIGRIYLGHTGLGIAQLLVGWVTCGLGAVI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WGVIDALLILTDKVGDPWGRPLRDGS HHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA