Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637498
Identifier: 121637498
GI number: 121637498
Start: 1796817
End: 1797482
Strand: Direct
Name: 121637498
Synonym: BCG_1629
Alternate gene names: NA
Gene position: 1796817-1797482 (Clockwise)
Preceding gene: 121637497
Following gene: 121637501
Centisome position: 41.07
GC content: 66.97
Gene sequence:
>666_bases GTGACCGAGCCACCCGGTTTTGGCGGACCGTCCGAGCCTTCCGGTGCACCGCGGACGTCGCGGACACGGGCGGTCCTGTT TGTGATGCTGGGTCTGTCGGCGACCGGTGTGTTGGTCGGTGGCCTGTGGGCGTGGATCGCCCCGCCAATCCATGCCGTCG TGGCCATCACACGCGCGGGTGAGCGGGTGCACGAGTATCTGGGCAGCGAATCCCAGAACTTCTTCATCGCGCCATTTATG CTGCTGGGGCTCTTGAGTGTGCTGGCTGTCGTGGCATCGGCATTGATGTGGCAGTGGCGAGAGCACCGCGGACCGCAGAT GGTTGCTGGGCTGTCGATTGGGCTGACGACCGCTGCGGCGATCGCGGCGGGAGTTGGCGCGCTGGTGGTTCGGTTGCGCT ACGGTGCGTTGGACTTTGACACCGTGCCACTTTCCCGCGGCGACCACGCCCTGACGTACGTCACCCAGGCCCCGCCGGTG TTTTTCGCCCGCCGGCCGCTGCAGATCGCCCTCACTCTCATGTGGCCGGCTGGCATCGCGTCGCTGGTATATGCCCTGCT TGCGGCCGGGACGGCGCGGGACGACCTGGGCGGCTATCCGGCTGTCGATCCGTCGTCGAACGCTCGTACTGAAGCCCTGG AAACCCCTCAGGCCCCGGTGTCCTAG
Upstream 100 bases:
>100_bases AGTGCGGTCGCCGGATGGTCGTCCAGGTCCGGCCCGACGGCTGGTGGGCGCGCTGTTCTCGCCACGGGCAGGTGGACTCG GCCGACTTGGCGACACAGCG
Downstream 100 bases:
>100_bases GAGAGTCGCAGCCGCCCGCCGGCATCCGGAGCGGACCGTGTCTCCGGTCGGGTGTCAGCGCTTGGATTCAAGCGGCAGAT CGTCGAACTGGTTTAAGTCT
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFM LLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPV FFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sequences:
>Translated_221_residues MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFM LLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPV FFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS >Mature_220_residues TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFML LGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVF FARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1222 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021213 [H]
Pfam domain/function: PF10821 DUF2567 [H]
EC number: NA
Molecular weight: Translated: 23183; Mature: 23052
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCHHEEEEECCHHHHH SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCHHEEEEECCHHHHH SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]