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The map label for this gene is ydjZ [C]

Identifier: 121637423

GI number: 121637423

Start: 1706281

End: 1707039

Strand: Reverse

Name: ydjZ [C]

Synonym: BCG_1554c

Alternate gene names: 121637423

Gene position: 1707039-1706281 (Counterclockwise)

Preceding gene: 121637430

Following gene: 121637417

Centisome position: 39.02

GC content: 66.8

Gene sequence:

>759_bases
GTGACGGCTCCCGCCATCTGCAACACCACCGAAACCGTACACGGTATCGCCACCTCGCTCGGCGCGGTCGCGCGTCAGGC
GTCGCTGCCGCGCATCGTGGGAACAGTGGTGGGAATCACAGTACTGGTAGTGGTCGCGCTGCTGGTTCCGGTGCCCACTG
CGGTGGAATTGCGCGACTGGGCCAAGTCACTGGGCGCGTGGTTCCCGCTGGCATTTTTGCTGGTGCATACCGTCGTCACG
GTGCCGCCATTCCCCCGCACCGCGTTCACGTTGGCCGCCGGGCTGTTGTTCGGCTCTGTGGTGGGCGTATTCATCGCGGT
GGTCGGCAGCACCGCTAGCGCGGTAATCGCGATGCTGCTGGTGCGTGCCACCGGCTGGCAGCTGAACAGTCTGGTGCGCC
GCCGAGCGATCAACCGGCTGGACGAGCGTCTGCGTGAGCGAGGCTGGCTGGCCATCTTGTCGCTGCGGCTCATTCCCGTC
GTCCCGTTCGCGGCGATCAACTATGCCGCCGGCGCCTCGGGCGTGCGGATCCTGTCCTTCGCCTGGGCGACCTTGGCAGG
CTTGCTCCCCGGCACCGCGGCGGTGGTCATCCTGGGCGACGCGTTCGCCGGTAGCGGTAGCCCGCTGCTGATCCTGGTGT
CGGTATGCACGGGCGCGCTAGGTCTGACTGGGCTCGTCTATGAGATCCGCAATTATCGACGGCAGCACCGACGCATGCCG
GGTTACGACGACCCTGTGCGCGAGCCGGCTCTCATTTGA

Upstream 100 bases:

>100_bases
CCCATATAGACGCCCAGGTGCGGCAATCGCGGCCGGAGTGTGACGAAACGCCAGCCTGGGGAAACGAGTTATTCATGTTG
ACCCCGTACGCTCCGAAGAC

Downstream 100 bases:

>100_bases
TAAACCTTCGGTCGGGGTCAGCGCATCAGCGCGTGCAAATTTGGCGTGGCAGCTCGATGCCGTCAACGCACCGCGCTACG
TTCGGTCGGCCAGCATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVT
VPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPV
VPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP
GYDDPVREPALI

Sequences:

>Translated_252_residues
MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVT
VPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPV
VPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP
GYDDPVREPALI
>Mature_251_residues
TAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTV
PPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVV
PFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPG
YDDPVREPALI

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1491_MYCTU (P67117)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   F70711
- RefSeq:   NP_216007.1
- RefSeq:   NP_335991.1
- EnsemblBacteria:   EBMYCT00000001626
- EnsemblBacteria:   EBMYCT00000071322
- GeneID:   886513
- GeneID:   924435
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1538
- KEGG:   mtu:Rv1491c
- TIGR:   MT1538
- TubercuList:   Rv1491c
- GeneTree:   EBGT00050000016793
- HOGENOM:   HBG568355
- OMA:   LLVIRIM
- ProtClustDB:   CLSK791196
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 26576; Mature: 26445

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x159a2474)-; HASH(0x153b40d8)-; HASH(0x15b452ac)-; HASH(0x12523388)-; HASH(0x1583eb6c)-; HASH(0x1594da54)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP
HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYDDPVREPALI
CCCCCCCCCCCH
>Mature Secondary Structure 
TAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP
HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYDDPVREPALI
CCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036