Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637417
Identifier: 121637417
GI number: 121637417
Start: 1700985
End: 1701956
Strand: Reverse
Name: 121637417
Synonym: BCG_1548c
Alternate gene names: NA
Gene position: 1701956-1700985 (Counterclockwise)
Preceding gene: 121637423
Following gene: 121637413
Centisome position: 38.91
GC content: 66.67
Gene sequence:
>972_bases ATGTGGTGTCCCAGTGTTTCGCTGTCGATCTGGGCTAACGCTTGGCTCGCCGGCAAGGCTGCTCCCGACGACGTGTTGGA TGCATTATCACTTTGGGCGCCAACGCAATCCGTCGCAGCTTATGATGCCGTGGCTGCGGGCCACACCGGGCTGCCGTGGC CCGACGTCCACGATGCTGGAACGGTCTCGCTCCTGCAGACACTGCGCGCCGCGGTGGGCCGGCGCCGACTGCGGGGGACG ATCAATGTGGTGTTGCCGGTGCCGGGCGATGTGCGCGGGCTGGCTGCGGGAACACAGTTCGAGCACGACGCCCTTGCCGC CGGCGAGGCGGTGATCGTCGCCAACCCGGAGGATCCCGGCAGCGCCGTTGGCCTGGTCCCGGAGTTCTCCTATGGCGATG TCGACGAAGCCGCGCAGAGCGAGCCACTCACGCCCGAATTGTGTGCACTTTCTTGGATGGTGTATTCACTTCCCGGGGCC CCAGTGTTGGAACACTACGAGCTCGGCGATGCCGAATACGCGTTGCGGTCAGCGGTGCGCTCGGCCGCCGAAGCCTTGAG CACCATCGGACTGGGATCTAGCGACGTCGCCAATCCCCGTGGCCTCGTCGAGCAGTTGCTCGAATCGTCACGGCAACACC GGGTTCCCGACCACGCGCCATCGCGCGCATTGCGGGTGCTCGAGAATGCCGCGCACGTCGATGCGATCATCGCGGTCAGT GCCGGGCTGAGTCGATTGCCGATCGGAACGCAGTCGTTGTCGGACGCTCAGCGTGCCACCGATGCGTTGAGACCGTTGAC CGCCGTGGTGCCGCTCGGCCCGGATGTCCGCGGTCACGGCGATCCTGCACTCGGCCTGGCCGGACTGACGCTAGCCACGC AGTGCGGCGGACGGCATGGCTGGCCGTTGATGCTGGACAGACAGCCCGGCACCGGATCGGGGCCACTCACCCGCGCAGGT ATACGGCCGTAA
Upstream 100 bases:
>100_bases CGAGCACCAACGCCGCGATAAGCCAGATCAAAGCGACGGGCATGCGCTTAGGATACGCGTGATCCGCGTCAGCCGGGTCG AACAACTACACTGCAAGATC
Downstream 100 bases:
>100_bases CGGAGTTCGTCGATCAAACCTCTGGCTAGTCGAGCGAACCGCGGGTCGGCATTGGGGGTGCTGGCCCGGGCGTACGCGAT GCCCGCTGCCTCGGCTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVANPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVPLGPDVRGHGDPALGLAGLTLATQCGGRHGWPLMLDRQPGTGSGPLTRAG IRP
Sequences:
>Translated_323_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVANPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVPLGPDVRGHGDPALGLAGLTLATQCGGRHGWPLMLDRQPGTGSGPLTRAG IRP >Mature_323_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVANPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVPLGPDVRGHGDPALGLAGLTLATQCGGRHGWPLMLDRQPGTGSGPLTRAG IRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.bovis Mb1522c, M.leprae ML1804 and M.avium MAV321 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33499; Mature: 33499
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAG CCCCCCCHHHHHHHEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCH TVSLLQTLRAAVGRRRLRGTINVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPG HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCHHHHCCCEEEEECCCCCC SAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGAPVLEHYELGDAEYALRSAVR CEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH SAAEALSTIGLGSSDVANPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLSRLPIGTQSLSDAQRATDALRPLTAVVPLGPDVRGHGDPALGLAGLTLATQCGGRHG CCCHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC WPLMLDRQPGTGSGPLTRAGIRP CCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAG CCCCCCCHHHHHHHEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCH TVSLLQTLRAAVGRRRLRGTINVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPG HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCHHHHCCCEEEEECCCCCC SAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGAPVLEHYELGDAEYALRSAVR CEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH SAAEALSTIGLGSSDVANPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLSRLPIGTQSLSDAQRATDALRPLTAVVPLGPDVRGHGDPALGLAGLTLATQCGGRHG CCCHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC WPLMLDRQPGTGSGPLTRAGIRP CCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]