Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637422
Identifier: 121637422
GI number: 121637422
Start: 1704395
End: 1705702
Strand: Direct
Name: 121637422
Synonym: BCG_1553
Alternate gene names: NA
Gene position: 1704395-1705702 (Clockwise)
Preceding gene: 121637421
Following gene: 121637424
Centisome position: 38.96
GC content: 57.03
Gene sequence:
>1308_bases GTGTCACAGTGCTTTGCTGTCAAAGGCATTGGCGGTGCCGACCAAGCGACACTGGGCAGTGCAGAAATCCTCGTGAAATA CGCTCAACTCGCTGACAAACGCGCTCGGGTATATGTCCTGGTGTCGACCTGGTTGGTCGTGTGGGGTATCTGGCATGTGT ATTTTGTCGAAGCTGTCTTTCCGAATGCCATCCTGTGGTTGCATTATTACGCGGCCAGCTATGAATTCGGGTTTGTACGT CGCGGGCTGGGCGGTGAACTGATTCGCATGTTGACCGGCGATCATTTCTTTGCCGGCGCCTATACCGTTCTGTGGACGTC TATCACGGTGTGGCTGATCGCCCTTGCCGTCGTGGTGTGGCTTATCCTTTCCACGGGCAACCGGTCCGAGCGCAGGATAA TGCTTGCCCTCCTCGTTCCGGTGCTACCCTTTGCCTTTTCTTACGCCATCTATAATCCACATCCGGAACTCTTCGGGATG ACCGCGTTGGTAGCCTTCAGCATTTTTCTGACCAGGGCCCACACCTCTCGAACCCGGGTGATCCTCAGTACGCTGTACGG ACTTACGATGGCCGTGCTGGCGCTCATACACGAAGCGATTCCACTGGAATTCGCACTCGGCGCGGTGCTGGCGATAATCG TGTTGTCGAAGAATGCGACAGGTGCGACAAGGCGAATCTGTACTGCGTTGGCCATCGGTCCGGGGACCGTCTCAGTATTG TTGCTCGCTGTGGTCGGGCGTCGCGATATCGCGGACCAGTTGTGTGCCCATATCCCGCATGGGATGGTCGAAAATCCGTG GGCGGTTGCAACGACACCGCAGCGAGTTCTCGATTACATATTCGGTCGTGTCGAGAGCCATGCAGATTACCACGATTGGG TGTGCGAGCATGTGACCCCGTGGTTTAACCTCGACTGGATTACCTCTGCAAAGCTGGTGGCCGTGGTTGGCTTCCGCGCA CTATTCGGTGCATTCCTCCTCGGGTTGCTGTTCTTCGTTGCCACGACATCGATGATCCGCTATGTCTCCGCCGTGCCGGT CAGAACCTTCTTTGCCGAACTGCGCGGCAATCTGGCGTTGCCGGTGCTGGCATCGGCATTGCTGGTTCCGCTGTTCATCA CCGCTGTCGACTGGACTCGCTGGTGGGTGATGATCACACTCGACGTGGCCATTGTCTACATCTTGTACGCGATCGACAGA CCGGAGATCGAGCAACCGCCGTCGAGGAGAAACGTGCAGGTCTTCGTCTGCGTTGTGTTGGTGCTGGCGGTGATACCGAC CGGGTCCGCCAACAACATCGGCAGATGA
Upstream 100 bases:
>100_bases CTGGATTGGCGAGCGATCCGTGGAGCCGAACCCGTTGCCACCGCCATTCTGCGTCGGTTAGTCTCTTTTTCGACCTTGGG GCGCGGAGGGTCGTTATGGT
Downstream 100 bases:
>100_bases GGCACCCCGCGGGACCACCCGAAGGCGGGCATGGTGACGTAGGCCAACCGCCGCTGACATGCTTGGGACGGTGATGCTGT TGCAGGCCTATTAGGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSQCFAVKGIGGADQATLGSAEILVKYAQLADKRARVYVLVSTWLVVWGIWHVYFVEAVFPNAILWLHYYAASYEFGFVR RGLGGELIRMLTGDHFFAGAYTVLWTSITVWLIALAVVVWLILSTGNRSERRIMLALLVPVLPFAFSYAIYNPHPELFGM TALVAFSIFLTRAHTSRTRVILSTLYGLTMAVLALIHEAIPLEFALGAVLAIIVLSKNATGATRRICTALAIGPGTVSVL LLAVVGRRDIADQLCAHIPHGMVENPWAVATTPQRVLDYIFGRVESHADYHDWVCEHVTPWFNLDWITSAKLVAVVGFRA LFGAFLLGLLFFVATTSMIRYVSAVPVRTFFAELRGNLALPVLASALLVPLFITAVDWTRWWVMITLDVAIVYILYAIDR PEIEQPPSRRNVQVFVCVVLVLAVIPTGSANNIGR
Sequences:
>Translated_435_residues MSQCFAVKGIGGADQATLGSAEILVKYAQLADKRARVYVLVSTWLVVWGIWHVYFVEAVFPNAILWLHYYAASYEFGFVR RGLGGELIRMLTGDHFFAGAYTVLWTSITVWLIALAVVVWLILSTGNRSERRIMLALLVPVLPFAFSYAIYNPHPELFGM TALVAFSIFLTRAHTSRTRVILSTLYGLTMAVLALIHEAIPLEFALGAVLAIIVLSKNATGATRRICTALAIGPGTVSVL LLAVVGRRDIADQLCAHIPHGMVENPWAVATTPQRVLDYIFGRVESHADYHDWVCEHVTPWFNLDWITSAKLVAVVGFRA LFGAFLLGLLFFVATTSMIRYVSAVPVRTFFAELRGNLALPVLASALLVPLFITAVDWTRWWVMITLDVAIVYILYAIDR PEIEQPPSRRNVQVFVCVVLVLAVIPTGSANNIGR >Mature_434_residues SQCFAVKGIGGADQATLGSAEILVKYAQLADKRARVYVLVSTWLVVWGIWHVYFVEAVFPNAILWLHYYAASYEFGFVRR GLGGELIRMLTGDHFFAGAYTVLWTSITVWLIALAVVVWLILSTGNRSERRIMLALLVPVLPFAFSYAIYNPHPELFGMT ALVAFSIFLTRAHTSRTRVILSTLYGLTMAVLALIHEAIPLEFALGAVLAIIVLSKNATGATRRICTALAIGPGTVSVLL LAVVGRRDIADQLCAHIPHGMVENPWAVATTPQRVLDYIFGRVESHADYHDWVCEHVTPWFNLDWITSAKLVAVVGFRAL FGAFLLGLLFFVATTSMIRYVSAVPVRTFFAELRGNLALPVLASALLVPLFITAVDWTRWWVMITLDVAIVYILYAIDRP EIEQPPSRRNVQVFVCVVLVLAVIPTGSANNIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1490_MYCTU (P64857)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: E70711 - RefSeq: NP_216006.1 - RefSeq: NP_335989.1 - EnsemblBacteria: EBMYCT00000002483 - EnsemblBacteria: EBMYCT00000070649 - GeneID: 886511 - GeneID: 924434 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1536 - KEGG: mtu:Rv1490 - TIGR: MT1536 - TubercuList: Rv1490 - GeneTree: EBGT00050000017968 - HOGENOM: HBG565151 - OMA: RWWATIT - ProtClustDB: CLSK791195 - GO: GO:0040007
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48150; Mature: 48019
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15c78158)-; HASH(0x15e69fe0)-; HASH(0x15e97ac8)-; HASH(0x1623e978)-; HASH(0x13aa2cb8)-; HASH(0x15c22c50)-; HASH(0x15dccca8)-; HASH(0x1521d388)-; HASH(0x15a87264)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQCFAVKGIGGADQATLGSAEILVKYAQLADKRARVYVLVSTWLVVWGIWHVYFVEAVF CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH PNAILWLHYYAASYEFGFVRRGLGGELIRMLTGDHFFAGAYTVLWTSITVWLIALAVVVW CHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LILSTGNRSERRIMLALLVPVLPFAFSYAIYNPHPELFGMTALVAFSIFLTRAHTSRTRV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHH ILSTLYGLTMAVLALIHEAIPLEFALGAVLAIIVLSKNATGATRRICTALAIGPGTVSVL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH LLAVVGRRDIADQLCAHIPHGMVENPWAVATTPQRVLDYIFGRVESHADYHDWVCEHVTP HHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC WFNLDWITSAKLVAVVGFRALFGAFLLGLLFFVATTSMIRYVSAVPVRTFFAELRGNLAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH PVLASALLVPLFITAVDWTRWWVMITLDVAIVYILYAIDRPEIEQPPSRRNVQVFVCVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VLAVIPTGSANNIGR HHHHCCCCCCCCCCH >Mature Secondary Structure SQCFAVKGIGGADQATLGSAEILVKYAQLADKRARVYVLVSTWLVVWGIWHVYFVEAVF CCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH PNAILWLHYYAASYEFGFVRRGLGGELIRMLTGDHFFAGAYTVLWTSITVWLIALAVVVW CHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LILSTGNRSERRIMLALLVPVLPFAFSYAIYNPHPELFGMTALVAFSIFLTRAHTSRTRV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHH ILSTLYGLTMAVLALIHEAIPLEFALGAVLAIIVLSKNATGATRRICTALAIGPGTVSVL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH LLAVVGRRDIADQLCAHIPHGMVENPWAVATTPQRVLDYIFGRVESHADYHDWVCEHVTP HHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC WFNLDWITSAKLVAVVGFRALFGAFLLGLLFFVATTSMIRYVSAVPVRTFFAELRGNLAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH PVLASALLVPLFITAVDWTRWWVMITLDVAIVYILYAIDRPEIEQPPSRRNVQVFVCVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VLAVIPTGSANNIGR HHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036