Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yfbK [C]
Identifier: 121637412
GI number: 121637412
Start: 1696449
End: 1697456
Strand: Direct
Name: yfbK [C]
Synonym: BCG_1543
Alternate gene names: 121637412
Gene position: 1696449-1697456 (Clockwise)
Preceding gene: 121637411
Following gene: 121637414
Centisome position: 38.78
GC content: 65.58
Gene sequence:
>1008_bases ATGACATTGCCGTTGCTGGGGCCGATGACGCTATCCGGCTTCGCGCATTCATGGTTCTTCCTATTCCTGTTTGTCGTGGC CGGACTGGTCGCGCTGTACATCCTGATGCAGCTGGCGCGCCAGCGGCGAATGCTGCGGTTCGCCAACATGGAGTTGCTGG AGAGCGTCGCACCCAAGCGGCCATCCCGCTGGCGGCATGTCCCGGCGATCCTGCTGGTGTTATCGCTGCTGCTGTTCACC ATCGCGATGGCCGGTCCGACGCATGACGTCCGGATTCCCCGTAACCGCGCGGTGGTGATGTTGGTGATCGACGTGTCGCA GTCGATGCGCGCCACCGACGTCGAGCCCAGCCGGATGGTGGCCGCGCAGGAGGCTGCCAAGCAGTTCGCCGACGAGTTGA CCCCGGGCATCAATCTGGGATTGATTGCCTACGCGGGCACGGCGACGGTCCTGGTGTCGCCGACGACCAACCGGGAGGCG ACCAAGAATGCGCTGGACAAGTTACAGTTCGCCGACCGTACCGCCACCGGGGAGGCGATCTTCACCGCGCTGCAGGCCAT CGCCACGGTTGGCGCGGTGATCGGTGGCGGCGACACGCCGCCGCCGGCGCGCATCGTGCTGTTCTCCGACGGCAAGGAGA CGATGCCGACCAACCCGGACAACCCCAAGGGCGCCTACACCGCCGCCCGCACCGCCAAGGACCAGGGCGTGCCGATTTCG ACGATCTCGTTCGGCACCCCATACGGCTTCGTCGAGATCGACGACCAGCGCCAACCGGTGCCCGTCGACGACGAAACGAT GAAGAAGGTCGCCCAGCTCTCCGGTGGAAATTCCTACAATGCGGCGACTTTGGCCGAGCTGAGGGCCGTTTACTCGTCGC TGCAGCAGCAGATCGGCTACGAGACCATCAAGGGTGACGCCAGCGTCGGCTGGTTGCGGTTGGGTGCGCTGGCGCTGGCG TTGGCGGCGCTAGCGGCGCTGCTCATCAACCGGCGGTTGCCGACTTAG
Upstream 100 bases:
>100_bases CTATCGCTTCGCACCGACCGCGACTGGCTTGCCGATATCGTACGATTCGTCGCCTCTCGCCGGCGTGGGGCATTGGCGGG ACACCAGTGATGGGTCAGTT
Downstream 100 bases:
>100_bases CTTCCCCCGCGGCCCCGGCAGCCCGCGAGCGTAACCTGGCTGCGATTTCCGGCGCGGATTTTCGCAGTGCGGTTACGCTC GGAAAGCGCGGGCCTCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTLPLLGPMTLSGFAHSWFFLFLFVVAGLVALYILMQLARQRRMLRFANMELLESVAPKRPSRWRHVPAILLVLSLLLFT IAMAGPTHDVRIPRNRAVVMLVIDVSQSMRATDVEPSRMVAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREA TKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS TISFGTPYGFVEIDDQRQPVPVDDETMKKVAQLSGGNSYNAATLAELRAVYSSLQQQIGYETIKGDASVGWLRLGALALA LAALAALLINRRLPT
Sequences:
>Translated_335_residues MTLPLLGPMTLSGFAHSWFFLFLFVVAGLVALYILMQLARQRRMLRFANMELLESVAPKRPSRWRHVPAILLVLSLLLFT IAMAGPTHDVRIPRNRAVVMLVIDVSQSMRATDVEPSRMVAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREA TKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS TISFGTPYGFVEIDDQRQPVPVDDETMKKVAQLSGGNSYNAATLAELRAVYSSLQQQIGYETIKGDASVGWLRLGALALA LAALAALLINRRLPT >Mature_334_residues TLPLLGPMTLSGFAHSWFFLFLFVVAGLVALYILMQLARQRRMLRFANMELLESVAPKRPSRWRHVPAILLVLSLLLFTI AMAGPTHDVRIPRNRAVVMLVIDVSQSMRATDVEPSRMVAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREAT KNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIST ISFGTPYGFVEIDDQRQPVPVDDETMKKVAQLSGGNSYNAATLAELRAVYSSLQQQIGYETIKGDASVGWLRLGALALAL AALAALLINRRLPT
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022933 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 36031; Mature: 35900
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLLGPMTLSGFAHSWFFLFLFVVAGLVALYILMQLARQRRMLRFANMELLESVAPKR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSRWRHVPAILLVLSLLLFTIAMAGPTHDVRIPRNRAVVMLVIDVSQSMRATDVEPSRMV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCHHHHH AAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREATKNALDKLQFADRTATGEAI HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHH FTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTPYGFVEIDDQRQPVPVDDETMKKVAQLSGGNSYNAATLAELRAVYSSLQQQIGY EEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASVGWLRLGALALALAALAALLINRRLPT CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLPLLGPMTLSGFAHSWFFLFLFVVAGLVALYILMQLARQRRMLRFANMELLESVAPKR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSRWRHVPAILLVLSLLLFTIAMAGPTHDVRIPRNRAVVMLVIDVSQSMRATDVEPSRMV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCHHHHH AAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREATKNALDKLQFADRTATGEAI HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHH FTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTPYGFVEIDDQRQPVPVDDETMKKVAQLSGGNSYNAATLAELRAVYSSLQQQIGY EEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASVGWLRLGALALALAALAALLINRRLPT CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA