Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637411
Identifier: 121637411
GI number: 121637411
Start: 1695485
End: 1696438
Strand: Direct
Name: 121637411
Synonym: BCG_1542
Alternate gene names: NA
Gene position: 1695485-1696438 (Clockwise)
Preceding gene: 121637410
Following gene: 121637412
Centisome position: 38.76
GC content: 68.34
Gene sequence:
>954_bases GTGACCGAATCCAAAGCGCCGGCGGTGGTGCATCCGCCGTCGATGCTGCGCGGGGACATCGACGACCCGAAGCTGGCGGC GGCGCTGCGCACCCTCGAGTTGACCGTCAAGCAGAAGCTCGACGGTGTCTTGCACGGCGATCACCTCGGCCTGATACCTG GGCCGGGTTCGGAGCCAGGGGAGTCGCGCCTCTACCAGCCCGGTGACGATGTCCGCCGGATGGACTGGGCGGTCACCGCT CGCACCACTCACCCGCATGTCCGGCAGATGATCGCCGACCGGGAACTGGAAACCTGGCTGGTGGTCGACATGTCGGCCAG CCTGGATTTTGGCACCGCCTGCTGCGAGAAACGTGACCTCGCGGTGGCGGCGGCGGCTGCCATCACCTTCCTCAACAGCG GCGGCGGCAACCGGCTCGGTGCGCTGATCGCCAACGGCGCCGCGATGACTCGGGTGCCGGCTCGCACCGGGCGCCAACAT CAGCACACGATGTTGCGCACCATTGCGACCATGCCGCAGGCCCCTGCGGGGGTCCGCGGCGACCTGGCGGTTGCCATCGA TGCGCTGCGCCGGCCCGAACGTCGTCGCGGGATGGCGGTGATCATCAGCGATTTTCTGGGCCCGATCAACTGGATGCGTC CGCTGCGGGCGATCGCAGCCCGCCATGAGGTGCTGGCCATCGAAGTGCTCGATCCGCGCGATGTCGAATTGCCGGACGTG GGTGATGTGGTGCTGCAGGACGCCGAATCCGGGGTTGTGCGCGAGTTCAGCATCGACCCTGCGCTGCGCGACGACTTCGC TAGGGCAGCTGCGGCGCACCGGGCCGACGTGGCGCGCACCATCCGCGGTTGCGGGGCACCCTTGCTATCGCTTCGCACCG ACCGCGACTGGCTTGCCGATATCGTACGATTCGTCGCCTCTCGCCGGCGTGGGGCATTGGCGGGACACCAGTGA
Upstream 100 bases:
>100_bases GTGTGCTGCAGACTGTGGCGCTGCCACAGGTGAATGCCGTTCCACAGCAAGGCCATTCGGTGCCGCCGGTGATGCAGGCC GCGGCCGCGGCGAGCGGCCG
Downstream 100 bases:
>100_bases TGGGTCAGTTATGACATTGCCGTTGCTGGGGCCGATGACGCTATCCGGCTTCGCGCATTCATGGTTCTTCCTATTCCTGT TTGTCGTGGCCGGACTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTESKAPAVVHPPSMLRGDIDDPKLAAALRTLELTVKQKLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRRMDWAVTA RTTHPHVRQMIADRELETWLVVDMSASLDFGTACCEKRDLAVAAAAAITFLNSGGGNRLGALIANGAAMTRVPARTGRQH QHTMLRTIATMPQAPAGVRGDLAVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLAIEVLDPRDVELPDV GDVVLQDAESGVVREFSIDPALRDDFARAAAAHRADVARTIRGCGAPLLSLRTDRDWLADIVRFVASRRRGALAGHQ
Sequences:
>Translated_317_residues MTESKAPAVVHPPSMLRGDIDDPKLAAALRTLELTVKQKLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRRMDWAVTA RTTHPHVRQMIADRELETWLVVDMSASLDFGTACCEKRDLAVAAAAAITFLNSGGGNRLGALIANGAAMTRVPARTGRQH QHTMLRTIATMPQAPAGVRGDLAVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLAIEVLDPRDVELPDV GDVVLQDAESGVVREFSIDPALRDDFARAAAAHRADVARTIRGCGAPLLSLRTDRDWLADIVRFVASRRRGALAGHQ >Mature_316_residues TESKAPAVVHPPSMLRGDIDDPKLAAALRTLELTVKQKLDGVLHGDHLGLIPGPGSEPGESRLYQPGDDVRRMDWAVTAR TTHPHVRQMIADRELETWLVVDMSASLDFGTACCEKRDLAVAAAAAITFLNSGGGNRLGALIANGAAMTRVPARTGRQHQ HTMLRTIATMPQAPAGVRGDLAVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLAIEVLDPRDVELPDVG DVVLQDAESGVVREFSIDPALRDDFARAAAAHRADVARTIRGCGAPLLSLRTDRDWLADIVRFVASRRRGALAGHQ
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1480_MYCTU (P64853)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: C70874 - RefSeq: NP_215996.1 - RefSeq: NP_335978.1 - ProteinModelPortal: P64853 - EnsemblBacteria: EBMYCT00000002659 - EnsemblBacteria: EBMYCT00000072701 - GeneID: 886531 - GeneID: 924442 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1527 - KEGG: mtu:Rv1480 - TIGR: MT1527 - TubercuList: Rv1480 - GeneTree: EBGT00050000016286 - HOGENOM: HBG701084 - OMA: DHLGLLP - ProtClustDB: CLSK871937 - GO: GO:0005829 - GO: GO:0040007 - InterPro: IPR002881 - InterPro: IPR002035 - SMART: SM00327
Pfam domain/function: PF01882 DUF58
EC number: NA
Molecular weight: Translated: 34334; Mature: 34203
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESKAPAVVHPPSMLRGDIDDPKLAAALRTLELTVKQKLDGVLHGDHLGLIPGPGSEPG CCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCCCCCC ESRLYQPGDDVRRMDWAVTARTTHPHVRQMIADRELETWLVVDMSASLDFGTACCEKRDL CCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCHHHH AVAAAAAITFLNSGGGNRLGALIANGAAMTRVPARTGRQHQHTMLRTIATMPQAPAGVRG HHHHHHHHHHHCCCCCCHHHHHHCCCCHHEECCHHCCCHHHHHHHHHHHHCCCCCCCCCC DLAVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLAIEVLDPRDVELPDV HHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC GDVVLQDAESGVVREFSIDPALRDDFARAAAAHRADVARTIRGCGAPLLSLRTDRDWLAD HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHH IVRFVASRRRGALAGHQ HHHHHHHHCCCCCCCCC >Mature Secondary Structure TESKAPAVVHPPSMLRGDIDDPKLAAALRTLELTVKQKLDGVLHGDHLGLIPGPGSEPG CCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCCCCCC ESRLYQPGDDVRRMDWAVTARTTHPHVRQMIADRELETWLVVDMSASLDFGTACCEKRDL CCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCHHHH AVAAAAAITFLNSGGGNRLGALIANGAAMTRVPARTGRQHQHTMLRTIATMPQAPAGVRG HHHHHHHHHHHCCCCCCHHHHHHCCCCHHEECCHHCCCHHHHHHHHHHHHCCCCCCCCCC DLAVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLAIEVLDPRDVELPDV HHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC GDVVLQDAESGVVREFSIDPALRDDFARAAAAHRADVARTIRGCGAPLLSLRTDRDWLAD HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHH IVRFVASRRRGALAGHQ HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036