Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637383
Identifier: 121637383
GI number: 121637383
Start: 1663400
End: 1664665
Strand: Direct
Name: 121637383
Synonym: BCG_1514
Alternate gene names: NA
Gene position: 1663400-1664665 (Clockwise)
Preceding gene: 121637381
Following gene: 121637385
Centisome position: 38.02
GC content: 64.14
Gene sequence:
>1266_bases GTGGCATTGCGGGAAACCTCACCGCGAATACATGAGCTGATCCGCGAGGCAGCGCGAATCGCCCTCAACCCGACCCAGGA ATGGCTCGACGAATTCGACCGTGCCATTCTGGCCGCCAACCCATCCATCGCTGCCGACCCCGCCCTGGCCACCGTTGTCA AGCGTTCCAATCGGGCGCATCTCATCCATTTCGCGGCCGCCAACCTGCGCAATCCCGGCGCCCCGGTGCCCGCGAACCTT GGTCCCGAGCCGCTGCGCATGGCCCGTGATCTCGTGCGCGTCGGTTTAGATGCCTTGGCCCTCGACATCTACCGCATCGG ACAAAACGTGGCCTGGCGGCGCTGGACGGACATCGCGTTCGGACTGACCTCCGACCCCGACGAGTTGCACGAATTACTGG ATGTGCCATTTCGGACAGCCAACGAGTTCGTCGACACCACCCTTGCGGGCATCACCACCGAGATGCAATTGGAACGCGAC AAGCTCACCCGCGACGTTCCTGCCGAACGCCGCAAAATCGTCCAGCTGCTCATCGACGGTGCCCCCATCAGCCGTGAGCA CGCCGAAGCGCGATTGGGCTACCCTCTCGACCGATCCCACACCGCCGCCGTCATCTGGGGTGACCAGGCCCAGGGCGACC ACAGCCACCTGGACCGAGTCGCCGACGCGTTCGGCCATGCCGGCGGATGCCCGCACCCGCTGGTCGTGGTAGCCGGCGCC GCGACTCGCTGGGTGTGGGTAAAAGACGCCCCCGGGTTTGACATCGACCTGATTCACGAGGTGCTCCATGACATACCCGA CGCGCGTATCGCCATCGGGGCCACCGCGCCGGGAATCGAGGGGTTCCGGCGCAGCCACCGAGACGCACTCACCACCGCTC GGATGATTATCCGGCTGGAATCACCGCACCGAGTCGCCTTTTTCACCGACGTCGAGATGGTCGCGTTGCTCACCGAAAAC GCCGAGGGTGCCGACGACTTCATCCAACGCACCCTCGGAAACCTCGAGTCGGCCAGCCCGGCTCTGAAAACGACGCTGTT GACCTTCATCAACCAGCAGTGCAACGCTTCTCGGGCCGCGAGACTTCTCTTCACCCACCGCAACACCTTGATGAACCGAC TCGAGACCGCGCAACGACTTCTGCCCCGCCCTCTCGCCGACACCACCATTCACGTCGCCGTCGCACTCGAAGCCCAGCAG TGGCGGGAGAAGCAAACCAGCGATCCTCCGGCAAAGAAAGAGTCGAATGGCACCAAGATGCGCTAG
Upstream 100 bases:
>100_bases GATAAGGGTCGCGCCGCCACCTTGTCCGATTCCAGGTCAAAATCCCCATAACCAGCACGAATCTGCTGTGCACAGTGCAC ATTCGCCCTACTATCGGCTC
Downstream 100 bases:
>100_bases CAAGACAGCGCAGCACAGACCGCTACGCTACGGCAGCAGCACGACCGAGCCGACCGTCTTGCGAGCCTCCAGGTCCTGAT GGGCGCGCAAGGCGTCGGCC
Product: putative transcriptional activator protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANLRNPGAPVPANL GPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERD KLTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGGCPHPLVVVAGA ATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFTDVEMVALLTEN AEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQ WREKQTSDPPAKKESNGTKMR
Sequences:
>Translated_421_residues MALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANLRNPGAPVPANL GPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERD KLTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGGCPHPLVVVAGA ATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFTDVEMVALLTEN AEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQ WREKQTSDPPAKKESNGTKMR >Mature_420_residues ALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANLRNPGAPVPANLG PEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERDK LTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGGCPHPLVVVAGAA TRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFTDVEMVALLTENA EGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQW REKQTSDPPAKKESNGTKMR
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46625; Mature: 46493
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAH CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCE LIHFAAANLRNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAF EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEE GLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAERRKIVQLLIDG CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC APISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGGCPHPLVVVAGA CCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC ATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLE CEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEC SPHRVAFFTDVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAA CCCEEEEEECHHEEHHHHCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHH RLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKQTSDPPAKKESNGTKM HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCC R C >Mature Secondary Structure ALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAH CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCE LIHFAAANLRNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAF EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEE GLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAERRKIVQLLIDG CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC APISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGGCPHPLVVVAGA CCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC ATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLE CEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEC SPHRVAFFTDVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAA CCCEEEEEECHHEEHHHHCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHH RLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKQTSDPPAKKESNGTKM HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA