Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yhbJ [C]
Identifier: 121637351
GI number: 121637351
Start: 1620767
End: 1621672
Strand: Direct
Name: yhbJ [C]
Synonym: BCG_1482
Alternate gene names: 121637351
Gene position: 1620767-1621672 (Clockwise)
Preceding gene: 121637350
Following gene: 121637352
Centisome position: 37.05
GC content: 64.35
Gene sequence:
>906_bases ATGATGAACCATGCTAGGGGCGTCGAGAATCGTTCGGAAGGCGGCGGTATCGACGTCGTCTTGGTAACCGGGCTGTCCGG GGCCGGGCGCGGCACGGCGGCTAAAGTGCTGGAAGACCTGGGCTGGTATGTGGCCGACAATCTGCCGCCCCAGCTGATTA CCCGCATGGTGGACTTCGGGCTGGCCGCCGGATCACGGATCACCCAGCTGGCGGTGGTAATGGATGTGCGATCGCGCGGA TTCACCGGCGACCTCGATTCGGTCCGCAACGAGCTGGCCACGCGTGCCATCACCCCGCGTGTGGTGTTCATGGAGGCGTC CGATGACACGTTGGTGCGCCGCTACGAACAGAATCGCCGCAGTCATCCGCTGCAGGGTGAGCAGACTCTGGCCGAGGGCA TTGCCGCAGAGCGCAGGATGCTAGCACCGGTTCGCGCCACCGCCGACCTGATCATCGACACGTCGACACTGTCGGTGGGG GGCTTAAGGGATAGCATCGAGCGTGCCTTCGGCGGTGATGGCGGCGCGACCACCAGCGTCACCGTTGAATCCTTCGGGTT CAAGTACGGCCTGCCGATGGACGCCGACATGGTCATGGACGTGCGGTTCCTGCCGAACCCGCACTGGGTGGACGAGTTGC GGCCACTGACCGGCCAACATCCGGCCGTGCGCGACTATGTGCTGCACCGGCCGGGCGCGGCTGAGTTCCTCGAGTCCTAC CATCGGTTGCTATCCCTGGTTGTCGACGGCTACCGTCGAGAGGGGAAGCGCTATATGACAATCGCCATCGGCTGTACCGG TGGTAAGCATCGCAGCGTCGCGATCGCTGAAGCACTGATGGGACTTCTGCGCTCCGATCAGCAACTGTCGGTGCGGGCGC TGCACCGGGATCTGGGTCGCGAATGA
Upstream 100 bases:
>100_bases AGGCCACCGTCGACGAAATCACCGCTGTTCCCGGTATCGGCGTGGCCACGGCCACGGCCGTCCACGACGCACTGCGACCT GACTCATCGGGGGCCGCGCG
Downstream 100 bases:
>100_bases CCGATGGCATCGTCGCGCTGGGCGGCGGACACGGCTTGTATGCGACGCTGTCTGCGGCCCGCCGGTTGACACCCTACGTT ACCGCCGTGGTGACCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MMNHARGVENRSEGGGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFGLAAGSRITQLAVVMDVRSRG FTGDLDSVRNELATRAITPRVVFMEASDDTLVRRYEQNRRSHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSTLSVG GLRDSIERAFGGDGGATTSVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHPAVRDYVLHRPGAAEFLESY HRLLSLVVDGYRREGKRYMTIAIGCTGGKHRSVAIAEALMGLLRSDQQLSVRALHRDLGRE
Sequences:
>Translated_301_residues MMNHARGVENRSEGGGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFGLAAGSRITQLAVVMDVRSRG FTGDLDSVRNELATRAITPRVVFMEASDDTLVRRYEQNRRSHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSTLSVG GLRDSIERAFGGDGGATTSVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHPAVRDYVLHRPGAAEFLESY HRLLSLVVDGYRREGKRYMTIAIGCTGGKHRSVAIAEALMGLLRSDQQLSVRALHRDLGRE >Mature_301_residues MMNHARGVENRSEGGGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFGLAAGSRITQLAVVMDVRSRG FTGDLDSVRNELATRAITPRVVFMEASDDTLVRRYEQNRRSHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSTLSVG GLRDSIERAFGGDGGATTSVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHPAVRDYVLHRPGAAEFLESY HRLLSLVVDGYRREGKRYMTIAIGCTGGKHRSVAIAEALMGLLRSDQQLSVRALHRDLGRE
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=38.1625441696113, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1421_MYCTU (P67106)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: B70903 - RefSeq: NP_215937.1 - RefSeq: NP_335915.1 - ProteinModelPortal: P67106 - SMR: P67106 - EnsemblBacteria: EBMYCT00000003440 - EnsemblBacteria: EBMYCT00000069630 - GeneID: 886676 - GeneID: 925500 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1464 - KEGG: mtu:Rv1421 - TIGR: MT1464 - TubercuList: Rv1421 - GeneTree: EBGT00050000017705 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32913; Mature: 32913
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNHARGVENRSEGGGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHH LAAGSRITQLAVVMDVRSRGFTGDLDSVRNELATRAITPRVVFMEASDDTLVRRYEQNRR HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHC SHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSTLSVGGLRDSIERAFGGDGGATTSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE TVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHPAVRDYVLHRPGAAEFLESY EEECCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHH HRLLSLVVDGYRREGKRYMTIAIGCTGGKHRSVAIAEALMGLLRSDQQLSVRALHRDLGR HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC E C >Mature Secondary Structure MMNHARGVENRSEGGGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHH LAAGSRITQLAVVMDVRSRGFTGDLDSVRNELATRAITPRVVFMEASDDTLVRRYEQNRR HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHC SHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSTLSVGGLRDSIERAFGGDGGATTSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE TVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHPAVRDYVLHRPGAAEFLESY EEECCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHH HRLLSLVVDGYRREGKRYMTIAIGCTGGKHRSVAIAEALMGLLRSDQQLSVRALHRDLGR HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036