Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637291
Identifier: 121637291
GI number: 121637291
Start: 1557862
End: 1558884
Strand: Direct
Name: 121637291
Synonym: BCG_1422
Alternate gene names: NA
Gene position: 1557862-1558884 (Clockwise)
Preceding gene: 121637290
Following gene: 121637297
Centisome position: 35.61
GC content: 63.64
Gene sequence:
>1023_bases ATGGGTGGTGCCCGCCGGCTCAAGCTCGACGGGAGCATCCCCAACCAGCTCGCCCGGGCGGCCGACGCGGCCGTCGCACT TGAGCGCAATGGTTTCGATGGGGGCTGGACAGCTGAAGCCAGCCATGATCCCTTTCTCCCGCTGCTACTGGCTGCCGAGC ACACGTCGCGACTTGAGCTTGGCACCAACATCGCGGTAGCGTTCGCGCGCAATCCGATGATTGTCGCCAACGTGGGCTGG GACCTACAGACGTACTCGAAGGGAAGATTGATCCTCGGTCTGGGAACCCAGATCCGGCCGCACATCGAGAAACGATTCAG CATGCCCTGGGGTCATCCGGCACGTCGGATGCGTGAATTCGTCGCCGCGCTGCGTGCGATCTGGTTGGCTTGGCAGGACG GGACCAAGCTTTGCTTCGAGGGTGAGTTCTACACCCACAAGATCATGACCCCGATGTTCACACCCGAGCCGCAGCCCTAT CCCGTTCCGAGAGTCTTCATCGCCGCTGTCGGTGAAGCGATGACCGAAATGTGCGGCGAAGTCGCCGACGGCCACCTCGG TCACCCTATGGTCTCGAAACGGTACCTCACCGAGGTGTCGGTGCCGGCGCTGCTACGTGGCCTGGCGCGATCGGGTCGCG ATCGCAGTGCCTTCGAGGTGTCGTGCGAGGTGATGGTGGCCACTGGCGCGGACGACGCCGAACTGGCGGCCGCCTGCACT GCCACGCGCAAGCAAATCGCCTTCTACGGATCCACGCCGGCTTACCGCAAAGTCCTCGAGCAGCATGGCTGGGGCGATCT GCACCCGGAGCTGCACCGCCTCTCCAAGCTGGGTGAGTGGGAGGCCATGGGTGGGCTAATCGACGACGAGATGCTCGGTG CTTTCGCGGTGGTCGGTCCGGTGGACACGATCGCCGGTGCCCTTCGCAATCGTTGTGAGGGCGTCGTCGACCGCGTCTTG CCGATTTTCATGGCCGCATCTCAGGAGTGTATTAACGCCGCACTGCAGGACTTTCGCCGTTGA
Upstream 100 bases:
>100_bases TATGTCGTCGGCTGCCCAGCGCGCAATGTGTGGCACGGCGAGTTGATGTTCAACCTCGGCGTGTCCTGCATACTGGATTT CTTACTGTAAAGTCACCCAA
Downstream 100 bases:
>100_bases GCGCGCCATCGGTGGATGAGGCCACCAAGATCGCTGCCCGCATAGAGGGCCCGCATTGCGTGCGGATCGGCGTTACCCGG CGGCGGGCACACGGGGCATT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEASHDPFLPLLLAAEHTSRLELGTNIAVAFARNPMIVANVGW DLQTYSKGRLILGLGTQIRPHIEKRFSMPWGHPARRMREFVAALRAIWLAWQDGTKLCFEGEFYTHKIMTPMFTPEPQPY PVPRVFIAAVGEAMTEMCGEVADGHLGHPMVSKRYLTEVSVPALLRGLARSGRDRSAFEVSCEVMVATGADDAELAAACT ATRKQIAFYGSTPAYRKVLEQHGWGDLHPELHRLSKLGEWEAMGGLIDDEMLGAFAVVGPVDTIAGALRNRCEGVVDRVL PIFMAASQECINAALQDFRR
Sequences:
>Translated_340_residues MGGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEASHDPFLPLLLAAEHTSRLELGTNIAVAFARNPMIVANVGW DLQTYSKGRLILGLGTQIRPHIEKRFSMPWGHPARRMREFVAALRAIWLAWQDGTKLCFEGEFYTHKIMTPMFTPEPQPY PVPRVFIAAVGEAMTEMCGEVADGHLGHPMVSKRYLTEVSVPALLRGLARSGRDRSAFEVSCEVMVATGADDAELAAACT ATRKQIAFYGSTPAYRKVLEQHGWGDLHPELHRLSKLGEWEAMGGLIDDEMLGAFAVVGPVDTIAGALRNRCEGVVDRVL PIFMAASQECINAALQDFRR >Mature_339_residues GGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEASHDPFLPLLLAAEHTSRLELGTNIAVAFARNPMIVANVGWD LQTYSKGRLILGLGTQIRPHIEKRFSMPWGHPARRMREFVAALRAIWLAWQDGTKLCFEGEFYTHKIMTPMFTPEPQPYP VPRVFIAAVGEAMTEMCGEVADGHLGHPMVSKRYLTEVSVPALLRGLARSGRDRSAFEVSCEVMVATGADDAELAAACTA TRKQIAFYGSTPAYRKVLEQHGWGDLHPELHRLSKLGEWEAMGGLIDDEMLGAFAVVGPVDTIAGALRNRCEGVVDRVLP IFMAASQECINAALQDFRR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1360_MYCTU (P64831)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: G70741 - RefSeq: NP_215876.1 - RefSeq: NP_335854.1 - ProteinModelPortal: P64831 - EnsemblBacteria: EBMYCT00000002710 - EnsemblBacteria: EBMYCT00000069644 - GeneID: 886813 - GeneID: 924507 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1405 - KEGG: mtu:Rv1360 - TIGR: MT1405 - TubercuList: Rv1360 - GeneTree: EBGT00050000014764 - HOGENOM: HBG569343 - OMA: RYVREVT - ProtClustDB: CLSK791121 - InterPro: IPR019919 - InterPro: IPR011251 - InterPro: IPR016048 - Gene3D: G3DSA:3.20.20.30 - TIGRFAMs: TIGR03617
Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like
EC number: NA
Molecular weight: Translated: 37252; Mature: 37121
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEASHDPFLPLLLAAEHTSRLEL CCCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCHHHHEECCCCCCEEC GTNIAVAFARNPMIVANVGWDLQTYSKGRLILGLGTQIRPHIEKRFSMPWGHPARRMREF CCCEEEEEECCCEEEEECCCCCEECCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHH VAALRAIWLAWQDGTKLCFEGEFYTHKIMTPMFTPEPQPYPVPRVFIAAVGEAMTEMCGE HHHHHHHHHEECCCCEEEEECCEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VADGHLGHPMVSKRYLTEVSVPALLRGLARSGRDRSAFEVSCEVMVATGADDAELAAACT HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHH ATRKQIAFYGSTPAYRKVLEQHGWGDLHPELHRLSKLGEWEAMGGLIDDEMLGAFAVVGP HHHHHEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCC VDTIAGALRNRCEGVVDRVLPIFMAASQECINAALQDFRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEASHDPFLPLLLAAEHTSRLEL CCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCHHHHEECCCCCCEEC GTNIAVAFARNPMIVANVGWDLQTYSKGRLILGLGTQIRPHIEKRFSMPWGHPARRMREF CCCEEEEEECCCEEEEECCCCCEECCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHH VAALRAIWLAWQDGTKLCFEGEFYTHKIMTPMFTPEPQPYPVPRVFIAAVGEAMTEMCGE HHHHHHHHHEECCCCEEEEECCEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VADGHLGHPMVSKRYLTEVSVPALLRGLARSGRDRSAFEVSCEVMVATGADDAELAAACT HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHH ATRKQIAFYGSTPAYRKVLEQHGWGDLHPELHRLSKLGEWEAMGGLIDDEMLGAFAVVGP HHHHHEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCC VDTIAGALRNRCEGVVDRVLPIFMAASQECINAALQDFRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036