Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637290
Identifier: 121637290
GI number: 121637290
Start: 1556687
End: 1557439
Strand: Direct
Name: 121637290
Synonym: BCG_1421
Alternate gene names: NA
Gene position: 1556687-1557439 (Clockwise)
Preceding gene: 121637289
Following gene: 121637291
Centisome position: 35.59
GC content: 62.15
Gene sequence:
>753_bases ATGTTCATGGCTCTTCGCGCCCCCATGCTTGAGCGCATGAACGGTTTGCATACAGATGACGCGCCGGTCAATTGGCTCGA GCGGCGAGGTGGCCGGCTTACGTCGAGGCGGAGGGTGACGTTGCTCCATGCTGGAGTGGAACACCCGATGCGGCTGTGGG GCGTCCAATCCGAGGCGATAACTGCCGCGATGGTGCTTAGCCGGAAGGTATCGGCCATCATTGCCGGACACTGCGGTGTG CGCCTAGTTGATCAGGGCGTGGGCGATGGCTTCGTCGCCGCGTTCGCCCATGCCAGCGATGCCGTCGCATGTGCTCTGGA GTTGCACCAGGCTCCGTTGTCCCCGATCGTCCTGCGCATCGGGATTCACACCGGTGAGGCGCAGTTGGTCGACGAGCGCA TCTACGCCGGCGCCACAATGAACCTGGCTGCAGAGCTACGGGATTTAGCCCATGGTGGGCAGACCGTGATGTCGGGTGCT ACCGAGGATGCGGTACTCGGCCGGCTTCCCATGCGCGCTTGGCTAATTGGCTTGAGGCCCATGGAAGGGTCCCCGGAAGG GCATAACTTCCCCCAGTCACAACGCATAGCACAATTGTGCCATCCGAACCTTCGCAACACCTTTCCGCCGCTGCGCATGC GCATCGCCGATGCGAGCGGAATTCCTTATGTGGGGCGGATTCTGGTTAACGTTCAGGTAGTTCCCCACTGGGAAGGAGGG TGTGCCGCAGCGGGGATGGTCCTTGCTGGGTGA
Upstream 100 bases:
>100_bases CGCGCAACACTCGACCTAGGATTGCGCGGCCAGCGCAGGCCCGGAGTTCGAATCGGATGCAATACGCAACCAATCTGGGC TCTTCTGCGCGTTGTCGCTG
Downstream 100 bases:
>100_bases AGCGCCATTGAGGGCCAGACGATAGGTTGGCCAGCGACGTCCTCAACTCAGACTCTCGGCGCGACCTGACCGGCGGTTAC GATCATCTGCTCGGACATTC
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVLSRKVSAIIAGHCGV RLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGA TEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG CAAAGMVLAG
Sequences:
>Translated_250_residues MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVLSRKVSAIIAGHCGV RLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGA TEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG CAAAGMVLAG >Mature_250_residues MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVLSRKVSAIIAGHCGV RLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGA TEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG CAAAGMVLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To class-3 of adenylyl cyclases
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1359_MYCTU (Q11029)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: F70741 - RefSeq: NP_215875.1 - RefSeq: NP_335852.1 - ProteinModelPortal: Q11029 - EnsemblBacteria: EBMYCT00000003308 - EnsemblBacteria: EBMYCT00000069057 - GeneID: 886841 - GeneID: 924597 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1403 - KEGG: mtu:Rv1359 - TIGR: MT1403 - TubercuList: Rv1359 - GeneTree: EBGT00050000014809 - HOGENOM: HBG128140 - OMA: SPERHNF - ProtClustDB: CLSK790812 - InterPro: IPR001054 - Gene3D: G3DSA:3.30.70.1230 - SMART: SM00044
Pfam domain/function: SSF55073 A/G_cyclase
EC number: NA
Molecular weight: Translated: 26887; Mature: 26887
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI CCEECCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCHHHH TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEE GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCHHHHHEECCC MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG CCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCC CAAAGMVLAG HHHCCEEECC >Mature Secondary Structure MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI CCEECCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCHHHH TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEE GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCHHHHHEECCC MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG CCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCC CAAAGMVLAG HHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036