Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637287
Identifier: 121637287
GI number: 121637287
Start: 1550543
End: 1551334
Strand: Reverse
Name: 121637287
Synonym: BCG_1418c
Alternate gene names: NA
Gene position: 1551334-1550543 (Counterclockwise)
Preceding gene: 121637288
Following gene: 121637286
Centisome position: 35.46
GC content: 57.95
Gene sequence:
>792_bases GTGTTAATTGCCGGATACCTAACAGATTGGAGAATCATGACCACCGCTCAACTTCGTCCTATCGCACCGCAGAAGTTGCA TTTTTCGGAAAATCTCAGTGTGTGGGTTTCTGATGCGCAATGCCGGCTTGTGGTATCGCAACCCGCGCTCGATCCCACGT TGTGGAATACATACCTTCAGGGTGCGCTTCGCGCCTATAGTAAGCACGGAGTCGAGTGTACCTTAGATCTCGACGCCATC AGTGACGGTTCCGATACACAGTTGTTCTTTGCCGCCATTGATATTGGAGGAGATGTAGTCGGGGGCGCTCGGGTAATCGG ACCGCTGCGGTCAGCCGATGACTCGCATGCGGTAGTCGAATGGGCTGGCAATCCCGGATTATCCGCGGTGCGCAAGATGA TCAATGACCGGGCGCCATTCGGGGTCGTGGAAGTGAAGTCCGGGTGGGTTAATAGTGACGCGCAGCGCAGTGATGCGATT GCTGCCGCCTTGGCGCGCGCCCTACCGCTAAGCATGTCCCTGTTGGGGGTTCAGTTTGTGATGGGGACCGCGGCGGCCCA CGCGCTGGACCGGTGGCGTTCTTCGGGGGGAGTAATAGCAGCGAGAATCCCGGCGGCAGCATACCCGGACGAGCGCTACC GGACCAAGATGATCTGGTGGGACCGCAGAACCTTGGCTAACCATGCCGAGCCAAAACAACTGTCAAGAATGCTTGTCGAG TCGCGCAAGCTTCTGCGCGATGTAGAAGCGTTGAGCGCAACCACCGCAGCGACCGCTGGAGCCGAACAGTGA
Upstream 100 bases:
>100_bases GCGTTGAACCCTGCCGTGCGGCGCCGTTCTGCGCAACGGCAGCAATTCTCCGGGCGCAGCCCCAACGTCTGCGCTGCTCG ATACAGGGGCAGCAAATCTC
Downstream 100 bases:
>100_bases CCATCCCACACGAGGGCGGCAGCACCGGCATTCTCGTCCTTCGTGACGATGACCACGACGATGTCCTGGTGCTCGATCGA CTACGCTCAGATCCGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLIAGYLTDWRIMTTAQLRPIAPQKLHFSENLSVWVSDAQCRLVVSQPALDPTLWNTYLQGALRAYSKHGVECTLDLDAI SDGSDTQLFFAAIDIGGDVVGGARVIGPLRSADDSHAVVEWAGNPGLSAVRKMINDRAPFGVVEVKSGWVNSDAQRSDAI AAALARALPLSMSLLGVQFVMGTAAAHALDRWRSSGGVIAARIPAAAYPDERYRTKMIWWDRRTLANHAEPKQLSRMLVE SRKLLRDVEALSATTAATAGAEQ
Sequences:
>Translated_263_residues MLIAGYLTDWRIMTTAQLRPIAPQKLHFSENLSVWVSDAQCRLVVSQPALDPTLWNTYLQGALRAYSKHGVECTLDLDAI SDGSDTQLFFAAIDIGGDVVGGARVIGPLRSADDSHAVVEWAGNPGLSAVRKMINDRAPFGVVEVKSGWVNSDAQRSDAI AAALARALPLSMSLLGVQFVMGTAAAHALDRWRSSGGVIAARIPAAAYPDERYRTKMIWWDRRTLANHAEPKQLSRMLVE SRKLLRDVEALSATTAATAGAEQ >Mature_263_residues MLIAGYLTDWRIMTTAQLRPIAPQKLHFSENLSVWVSDAQCRLVVSQPALDPTLWNTYLQGALRAYSKHGVECTLDLDAI SDGSDTQLFFAAIDIGGDVVGGARVIGPLRSADDSHAVVEWAGNPGLSAVRKMINDRAPFGVVEVKSGWVNSDAQRSDAI AAALARALPLSMSLLGVQFVMGTAAAHALDRWRSSGGVIAARIPAAAYPDERYRTKMIWWDRRTLANHAEPKQLSRMLVE SRKLLRDVEALSATTAATAGAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1356_MYCTU (P64827)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: C70741 - RefSeq: NP_215872.1 - RefSeq: NP_335848.1 - ProteinModelPortal: P64827 - EnsemblBacteria: EBMYCT00000002704 - EnsemblBacteria: EBMYCT00000071973 - GeneID: 886850 - GeneID: 924607 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1399 - KEGG: mtu:Rv1356c - TIGR: MT1399 - TubercuList: Rv1356c - GeneTree: EBGT00050000017900 - HOGENOM: HBG580441 - OMA: AHAITEW - ProtClustDB: CLSK791119
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28481; Mature: 28481
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAGYLTDWRIMTTAQLRPIAPQKLHFSENLSVWVSDAQCRLVVSQPALDPTLWNTYLQ CEEEEEECCEEEEEECCCCCCCCCCEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHH GALRAYSKHGVECTLDLDAISDGSDTQLFFAAIDIGGDVVGGARVIGPLRSADDSHAVVE HHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEE WAGNPGLSAVRKMINDRAPFGVVEVKSGWVNSDAQRSDAIAAALARALPLSMSLLGVQFV ECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGTAAAHALDRWRSSGGVIAARIPAAAYPDERYRTKMIWWDRRTLANHAEPKQLSRMLVE HHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHH SRKLLRDVEALSATTAATAGAEQ HHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIAGYLTDWRIMTTAQLRPIAPQKLHFSENLSVWVSDAQCRLVVSQPALDPTLWNTYLQ CEEEEEECCEEEEEECCCCCCCCCCEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHH GALRAYSKHGVECTLDLDAISDGSDTQLFFAAIDIGGDVVGGARVIGPLRSADDSHAVVE HHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEE WAGNPGLSAVRKMINDRAPFGVVEVKSGWVNSDAQRSDAIAAALARALPLSMSLLGVQFV ECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGTAAAHALDRWRSSGGVIAARIPAAAYPDERYRTKMIWWDRRTLANHAEPKQLSRMLVE HHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHH SRKLLRDVEALSATTAATAGAEQ HHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036