Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637273
Identifier: 121637273
GI number: 121637273
Start: 1534698
End: 1535060
Strand: Reverse
Name: 121637273
Synonym: BCG_1404c
Alternate gene names: NA
Gene position: 1535060-1534698 (Counterclockwise)
Preceding gene: 121637274
Following gene: 121637261
Centisome position: 35.09
GC content: 62.81
Gene sequence:
>363_bases ATGACCGCACCCGAAACGCCCGCGGCGCAGCACGCCGAGCCTGCCATCGCCGTCGAGAGGATTCGCACCGCTTTGCTCGG CTACCGGATCATGGCGTGGACGACGGGCCTCTGGCTCATCGCACTGTGCTACGAGATCGTGGTCCGCTACGTCGTCAAGG TTGACAATCCGCCGACGTGGATCGGTGTGGTGCACGGCTGGGTGTACTTCACGTATCTGCTTCTGACGTTGAACCTGGCG GTCAAGGTCCGCTGGCCGCTCGGCAAAACAGCCGGTGTTCTGCTCGCCGGCACAATTCCGCTGCTCGGCATCGTCGTCGA GCACTTCCAGACCAAAGAGATCAAGGCCCGCTTCGGGCTTTAG
Upstream 100 bases:
>100_bases CGGCGCAGCAGCCACCCGACGATCCCGTACTACGGGAATACAACGCCTACCTAGCCGAGCTAGCCAAGGACGATGCCAGG AAGCAGAACAGGACCACCGC
Downstream 100 bases:
>100_bases CCTGTCGCCAGGGAGCGCAGCGCCGGCAGCAGCAGAGCCAACGCGCGACCGCGATGGGATACCGCGTCCTTTTCCGCCGG GCTCAGCTGGGCCGCTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHGWVYFTYLLLTLNLA VKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL
Sequences:
>Translated_120_residues MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHGWVYFTYLLLTLNLA VKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL >Mature_119_residues TAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHGWVYFTYLLLTLNLAV KVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1176
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1342_MYCTU (P0A5E7)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: E70739 - RefSeq: NP_335834.1 - RefSeq: YP_177800.1 - EnsemblBacteria: EBMYCT00000003932 - EnsemblBacteria: EBMYCT00000071380 - GeneID: 886862 - GeneID: 924653 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1383 - KEGG: mtu:Rv1342c - TIGR: MT1383 - TubercuList: Rv1342c - GeneTree: EBGT00050000016465 - HOGENOM: HBG669021 - OMA: WVYFVYL - ProtClustDB: CLSK799374 - GO: GO:0040007
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13382; Mature: 13251
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15a66210)-; HASH(0x15a89fd8)-; HASH(0x15768f20)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure TAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036