| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is oppD [C]
Identifier: 121637209
GI number: 121637209
Start: 1460057
End: 1461895
Strand: Reverse
Name: oppD [C]
Synonym: BCG_1340c
Alternate gene names: 121637209
Gene position: 1461895-1460057 (Counterclockwise)
Preceding gene: 121637210
Following gene: 121637208
Centisome position: 33.42
GC content: 66.23
Gene sequence:
>1839_bases ATGAGCCCCCTGCTCGAGGTGACCGATTTGGCCGTCACCTTCAGGACCGATGGCGATCCGGTGACCGCGGTGCGCGGGAT CAGCTACCGCGTCGAGCCCGGCGAGGTGGTCGCGATGGTGGGCGAATCGGGTTCAGGTAAGTCCGCAGCGGCGATGGCGG TGGTGGGCCTGCTGCCCGAGTACGCGCAGGTGCGTGGTTCGGTTCGGCTACAGGGTACCGAACTGTTGGGGCTTGCCGAC AACGCGATGTCCCGGTTTCGAGGCAAGGCGATCGGCACGGTGTTCCAGGATCCGATGTCTGCGCTCACCCCTGTCTACAC CGTCGGCGACCAAATCGCCGAGGCCATCGAGGTGCACCAGCCCCGTGTTGGCAAGAAGGCCGCTCGTCGGCGTGCGGTGG AACTGCTTGACCTGGTCGGTATTTCGCAGCCGCAGCGGCGTTCCCGTGCGTTTCCGCATGAGCTTTCAGGTGGCGAACGC CAACGCGTGGTGATCGCCATCGCGATCGCCAACGATCCCGACCTGTTGATCTGTGACGAACCGACCACGGCGCTCGACGT CACGGTGCAGGCGCAGATCCTCGACGTCCTCAAGGCGGCGCGCGACGTCACCGGCGCCGGGGTGCTGATCATCACCCACG ACCTCGGCGTCGTGGCCGAGTTCGCCGACCGGGCGCTGGTGATGTACGCCGGACGGGTCGTCGAGTCGGCCGGGGTGAAT GATCTGTACCGCGATCGCCGGATGCCCTACACCGTGGGGCTTTTAGGCTCGGTCCCCCGGCTGGATGCCGCGCAGGGCAC CCGGCTGGTGCCGATACCGGGTGCGCCCCCGTCGCTGGCGGGCTTGGCACCGGGTTGCCCGTTCGCGCCGCGCTGCCCGC TAGTCATCGACGAATGCCTTACCGCGGAACCCGAATTGCTTGACGTCGCTACCGATCACCGGGCGGCCTGCATCCGCACC GAGCTGGTCACCGGGCGCAGCGCCGCCGACATCTACCGGGTCAAAACCGAGGCCCGCCCGGCTGCACTCGGCGACGCCTC GGTGGTCGTGCGGGTACGTCATCTAGTCAAAACCTACCGGCTGGCCAAGGGCGTGGTGCTGCGCCGGGCGATCGGCGAGG TCCGCGCGGTCGACGGCATCAGTCTCGAACTCCGGCAGGGCCGCACGTTGGGTATCGTCGGCGAATCCGGTTCGGGCAAG TCGACCACCCTGCACGAGATCCTGGAGCTGGCTGCGCCGCAATCGGGATCGATCGAAGTCCTCGGCACTGACGTCGCCAC GCTGGGGACAGCGGAACGCCGATCGCTGCGCCGCGACATCCAGGTGGTCTTCCAAGACCCGGTGGCGTCCTTAGACCCGC GGCTGCCGGTCTTCGATCTGATTGCCGAACCATTGCAGGCCAATGGGTTCGGCAAGAACGAGACTCACGCGCGGGTCGCC GAGCTGCTCGATATCGTCGGACTGCGCCACGGCGACGCCAGTCGTTATCCCGCCGAGTTCTCCGGCGGTCAGAAGCAGCG CATCGGCATCGCGCGGGCACTGGCGCTCCAACCCAAGATCCTGGCACTCGACGAACCGGTGTCGGCACTCGATGTCTCCA TTCAGGCCGGGATCATCAACCTGCTGCTCGACCTCCAAGAGCAGTTCGGGTTGTCATATTTATTTGTTTCCCACGATCTT TCGGTGGTCAAACACCTCGCCCACCAGGTGGCGGTCATGCTTGCCGGTACCGTTGTTGAGCAGGGCGACAGTGAGGAGGT CTTCGGCAATCCGAAACACGAGTACACCAGGCGACTGCTGGGCGCGGTACCGCAACCGGATCCGGCCCGTCGTGGCTGA
Upstream 100 bases:
>100_bases CCAGTATCCTGGTGTTGATTCTGGTGTGCGCCAACCTGACCGGCGATGGCCTGCGCGACGCGCTGGACCCAGCCAGCAGA TCCCTGCGCCGTGGTGTGCG
Downstream 100 bases:
>100_bases CCGTGGCCAGCGACGAGGCTGCGCCCCGGGCATCGCGTCTGCGCTCAGGGCGTCGTTTCAGGGGAAATCCAGACCCTGGA CGCAGACTCGATATTGGGCT
Product: putative oligopeptide-transport ATP-binding protein ABC transporter oppD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRGSVRLQGTELLGLAD NAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGER QRVVIAIAIANDPDLLICDEPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVN DLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDECLTAEPELLDVATDHRAACIRT ELVTGRSAADIYRVKTEARPAALGDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGK STTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVA ELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLLLDLQEQFGLSYLFVSHDL SVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRRLLGAVPQPDPARRG
Sequences:
>Translated_612_residues MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRGSVRLQGTELLGLAD NAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGER QRVVIAIAIANDPDLLICDEPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVN DLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDECLTAEPELLDVATDHRAACIRT ELVTGRSAADIYRVKTEARPAALGDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGK STTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVA ELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLLLDLQEQFGLSYLFVSHDL SVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRRLLGAVPQPDPARRG >Mature_611_residues SPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRGSVRLQGTELLGLADN AMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQ RVVIAIAIANDPDLLICDEPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVND LYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDECLTAEPELLDVATDHRAACIRTE LVTGRSAADIYRVKTEARPAALGDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKS TTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVAE LLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLLLDLQEQFGLSYLFVSHDLS VVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRRLLGAVPQPDPARRG
Specific function: Probably Part Of A Binding-Protein-Dependent Transport System Yliabcd. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1123
COG function: function code R; ATPase components of various ABC-type transport systems, contain duplicated ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains
Homologues:
Organism=Homo sapiens, GI42741659, Length=232, Percent_Identity=33.6206896551724, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI171184400, Length=247, Percent_Identity=35.2226720647773, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI9955968, Length=251, Percent_Identity=32.6693227091633, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI9955966, Length=251, Percent_Identity=32.6693227091633, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI45243524, Length=251, Percent_Identity=32.6693227091633, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI148612844, Length=232, Percent_Identity=33.1896551724138, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI42490749, Length=228, Percent_Identity=32.0175438596491, Blast_Score=90, Evalue=8e-18, Organism=Homo sapiens, GI255708477, Length=232, Percent_Identity=33.1896551724138, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI21536378, Length=235, Percent_Identity=30.6382978723404, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI4505771, Length=229, Percent_Identity=31.8777292576419, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI9961252, Length=225, Percent_Identity=32, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI21536376, Length=260, Percent_Identity=26.1538461538462, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI9961250, Length=233, Percent_Identity=31.7596566523605, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI89111135, Length=234, Percent_Identity=29.0598290598291, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI9955963, Length=215, Percent_Identity=34.4186046511628, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI9665248, Length=232, Percent_Identity=28.448275862069, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI156105685, Length=240, Percent_Identity=31.25, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI46592964, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI46592956, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592898, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592971, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592978, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592915, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI21729873, Length=212, Percent_Identity=28.7735849056604, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI15149474, Length=212, Percent_Identity=28.7735849056604, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI116734710, Length=241, Percent_Identity=26.5560165975104, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI105990541, Length=209, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI27436953, Length=213, Percent_Identity=27.6995305164319, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI27477115, Length=215, Percent_Identity=28.3720930232558, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI73747915, Length=214, Percent_Identity=30.8411214953271, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI6005701, Length=218, Percent_Identity=27.0642201834862, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI145693107, Length=617, Percent_Identity=44.7325769854133, Blast_Score=452, Evalue=1e-128, Organism=Escherichia coli, GI48994883, Length=302, Percent_Identity=46.3576158940397, Blast_Score=274, Evalue=1e-74, Organism=Escherichia coli, GI1789963, Length=316, Percent_Identity=44.620253164557, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=51.4767932489451, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI1787759, Length=319, Percent_Identity=40.1253918495298, Blast_Score=226, Evalue=5e-60, Organism=Escherichia coli, GI1789962, Length=258, Percent_Identity=43.7984496124031, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1788506, Length=274, Percent_Identity=43.0656934306569, Blast_Score=209, Evalue=5e-55, Organism=Escherichia coli, GI1787758, Length=247, Percent_Identity=45.3441295546559, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1787548, Length=322, Percent_Identity=37.5776397515528, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1787547, Length=255, Percent_Identity=38.8235294117647, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1789891, Length=205, Percent_Identity=42.9268292682927, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1786398, Length=254, Percent_Identity=37.007874015748, Blast_Score=155, Evalue=8e-39, Organism=Escherichia coli, GI1787712, Length=236, Percent_Identity=35.5932203389831, Blast_Score=135, Evalue=9e-33, Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=36.0655737704918, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI48994997, Length=235, Percent_Identity=37.4468085106383, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1789890, Length=237, Percent_Identity=36.2869198312236, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=36.9565217391304, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=36.3247863247863, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788761, Length=244, Percent_Identity=36.0655737704918, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI87081791, Length=255, Percent_Identity=32.156862745098, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=33.0472103004292, Blast_Score=125, Evalue=9e-30, Organism=Escherichia coli, GI1788450, Length=233, Percent_Identity=32.618025751073, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1789672, Length=239, Percent_Identity=33.0543933054393, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=34.3220338983051, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1788644, Length=245, Percent_Identity=34.6938775510204, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1789873, Length=228, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=4e-26, Organism=Escherichia coli, GI1787370, Length=237, Percent_Identity=31.6455696202532, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=34.1666666666667, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=32.3008849557522, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786563, Length=201, Percent_Identity=37.3134328358209, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=33.4745762711864, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI1786872, Length=211, Percent_Identity=31.7535545023697, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=30.3418803418803, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=30.3030303030303, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1786253, Length=213, Percent_Identity=32.8638497652582, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787164, Length=229, Percent_Identity=31.4410480349345, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1789586, Length=234, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI48995001, Length=234, Percent_Identity=29.4871794871795, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790739, Length=231, Percent_Identity=30.3030303030303, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1790162, Length=239, Percent_Identity=27.1966527196653, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=31.4432989690722, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1786319, Length=251, Percent_Identity=27.0916334661355, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786803, Length=231, Percent_Identity=28.1385281385281, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790544, Length=274, Percent_Identity=27.007299270073, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787112, Length=225, Percent_Identity=32, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=25.6198347107438, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786345, Length=235, Percent_Identity=28.5106382978723, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790534, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789991, Length=213, Percent_Identity=27.2300469483568, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788165, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787143, Length=226, Percent_Identity=30.9734513274336, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790190, Length=254, Percent_Identity=27.9527559055118, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789593, Length=226, Percent_Identity=27.4336283185841, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787792, Length=215, Percent_Identity=29.7674418604651, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788053, Length=212, Percent_Identity=29.2452830188679, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=165, Percent_Identity=29.6969696969697, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786654, Length=242, Percent_Identity=27.6859504132231, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=24.2009132420091, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI48994943, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1786981, Length=205, Percent_Identity=34.1463414634146, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1786653, Length=221, Percent_Identity=30.316742081448, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788002, Length=224, Percent_Identity=30.3571428571429, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193202349, Length=229, Percent_Identity=34.9344978165939, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI193208177, Length=231, Percent_Identity=34.6320346320346, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25146777, Length=228, Percent_Identity=34.2105263157895, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI212646699, Length=222, Percent_Identity=33.7837837837838, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI193211017, Length=232, Percent_Identity=32.7586206896552, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71996809, Length=232, Percent_Identity=32.7586206896552, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193211015, Length=232, Percent_Identity=32.7586206896552, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI115534520, Length=246, Percent_Identity=30.0813008130081, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115535101, Length=226, Percent_Identity=29.646017699115, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565938, Length=235, Percent_Identity=31.063829787234, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=32.3404255319149, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17567265, Length=225, Percent_Identity=29.7777777777778, Blast_Score=89, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17567269, Length=226, Percent_Identity=28.7610619469027, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193209708, Length=227, Percent_Identity=32.15859030837, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17543740, Length=251, Percent_Identity=30.2788844621514, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17569143, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558664, Length=220, Percent_Identity=33.1818181818182, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71984940, Length=250, Percent_Identity=31.6, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17569145, Length=243, Percent_Identity=31.2757201646091, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17569081, Length=218, Percent_Identity=28.8990825688073, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17533971, Length=240, Percent_Identity=28.3333333333333, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71992290, Length=253, Percent_Identity=28.8537549407115, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=199, Percent_Identity=28.1407035175879, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17551702, Length=233, Percent_Identity=27.4678111587983, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17551700, Length=165, Percent_Identity=32.1212121212121, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115533592, Length=240, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI86564969, Length=224, Percent_Identity=29.4642857142857, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146765, Length=224, Percent_Identity=29.4642857142857, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71992066, Length=224, Percent_Identity=29.4642857142857, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71992070, Length=224, Percent_Identity=29.4642857142857, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983523, Length=235, Percent_Identity=26.8085106382979, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983516, Length=235, Percent_Identity=26.8085106382979, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983510, Length=235, Percent_Identity=26.8085106382979, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555318, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17511077, Length=263, Percent_Identity=26.615969581749, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=23.8297872340426, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71996550, Length=210, Percent_Identity=29.5238095238095, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992285, Length=250, Percent_Identity=27.6, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=250, Percent_Identity=29.6, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6322640, Length=232, Percent_Identity=31.8965517241379, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323217, Length=222, Percent_Identity=32.4324324324324, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319856, Length=231, Percent_Identity=26.8398268398268, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=237, Percent_Identity=29.1139240506329, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=231, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=185, Percent_Identity=25.9459459459459, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24659289, Length=232, Percent_Identity=34.4827586206897, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI23397593, Length=226, Percent_Identity=34.5132743362832, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI281363262, Length=240, Percent_Identity=32.9166666666667, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24653245, Length=239, Percent_Identity=33.0543933054393, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI17136662, Length=224, Percent_Identity=33.0357142857143, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641565, Length=242, Percent_Identity=30.9917355371901, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI85726357, Length=238, Percent_Identity=30.672268907563, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357907, Length=217, Percent_Identity=31.3364055299539, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161077321, Length=248, Percent_Identity=29.4354838709677, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI221460257, Length=237, Percent_Identity=30.8016877637131, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI85816269, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580553, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI85724864, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580555, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643674, Length=220, Percent_Identity=26.3636363636364, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552345, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552359, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550972, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552347, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552335, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583969, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552343, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552349, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552341, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552363, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552361, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552353, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552337, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552357, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552339, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552355, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552351, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574533, Length=205, Percent_Identity=30.7317073170732, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24641342, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI17647959, Length=171, Percent_Identity=30.9941520467836, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI116007184, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI221500365, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI19920928, Length=223, Percent_Identity=29.1479820627803, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1281_MYCTU (P63395)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: A70756 - RefSeq: NP_215797.1 - RefSeq: NP_335765.1 - ProteinModelPortal: P63395 - SMR: P63395 - EnsemblBacteria: EBMYCT00000003124 - EnsemblBacteria: EBMYCT00000068938 - GeneID: 886997 - GeneID: 924755 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1318 - KEGG: mtu:Rv1281c - TIGR: MT1318 - TubercuList: Rv1281c - GeneTree: EBGT00050000015050 - HOGENOM: HBG758042 - OMA: AACIRTD - ProtClustDB: CLSK791077 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 - SMART: SM00382 - TIGRFAMs: TIGR01727
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY
EC number: NA
Molecular weight: Translated: 65294; Mature: 65163
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPE CCCCCEEEEEEEEEECCCCCEEEEECCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCHH YAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQ HHHHCCCEEEECCEEEEEHHHHHHHHCCCHHHHHHHCHHHHHCHHHHHHHHHHHHHHHCC PRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDE CCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVN CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHEEEHHHHHHHHCCCCH DLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDECL HHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH TAEPELLDVATDHRAACIRTELVTGRSAADIYRVKTEARPAALGDASVVVRVRHLVKTYR CCCCCEEEECCCCCHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH LAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEILELAAPQSGSIEV HHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEE LGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVA EECCHHHHCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH ELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH LLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRRLL HHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GAVPQPDPARRG CCCCCCCCCCCC >Mature Secondary Structure SPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPE CCCCEEEEEEEEEECCCCCEEEEECCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCHH YAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQ HHHHCCCEEEECCEEEEEHHHHHHHHCCCHHHHHHHCHHHHHCHHHHHHHHHHHHHHHCC PRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDE CCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVN CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHEEEHHHHHHHHCCCCH DLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDECL HHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH TAEPELLDVATDHRAACIRTELVTGRSAADIYRVKTEARPAALGDASVVVRVRHLVKTYR CCCCCEEEECCCCCHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH LAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEILELAAPQSGSIEV HHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEE LGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVA EECCHHHHCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH ELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH LLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRRLL HHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GAVPQPDPARRG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036