Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637197
Identifier: 121637197
GI number: 121637197
Start: 1445203
End: 1445577
Strand: Reverse
Name: 121637197
Synonym: BCG_1328c
Alternate gene names: NA
Gene position: 1445577-1445203 (Counterclockwise)
Preceding gene: 121637198
Following gene: 121637196
Centisome position: 33.05
GC content: 66.67
Gene sequence:
>375_bases ATGACGACGATGATTACTCTTCGGCGACGGTTCGCGGTGGCCGTCGCCGGCGTCGCCACTGCCGCCGCGACGACCGTCAC CCTGGCTCCCGCACCAGCAAATGCCGCCGATGTCTATGGCGCAATTGCCTACTCCGGCAACGGCTCGTGGGGCCGATCGT GGGACTACCCAACCCGGGCGGCTGCCGAAGCCACCGCCGTCAAGTCGTGTGGCTACTCCGACTGCAAGGTGCTCACCAGT TTCACCGCCTGCGGCGCCGTCGCCGCCAACGATAGGGCATACCAGGGAGGAGTTGGACCCACCTTGGCCGCCGCCATGAA GGACGCCCTGACCAAGCTCGGCGGCGGCTACATCGACACCTGGGCCTGCAACTAA
Upstream 100 bases:
>100_bases CGACTGGGGTAAGCAGGTCACCGCCACCAAACCGGTCTAGCCATCGTCCTAATTGCTTGTTGAAACCGCCGCACCGCCGG CATTCGGAAAGGACTCACCA
Downstream 100 bases:
>100_bases TCCCGCACGCCCGCTTAGGCAGCCGACCGATCGTCGGTACCGCCGTGCATCCCGGTAGCAACGCTGTCGACTGCGCCCGC GCAGATCGGCCTGCCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTTMITLRRRFAVAVAGVATAAATTVTLAPAPANAADVYGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTS FTACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDTWACN
Sequences:
>Translated_124_residues MTTMITLRRRFAVAVAGVATAAATTVTLAPAPANAADVYGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTS FTACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDTWACN >Mature_123_residues TTMITLRRRFAVAVAGVATAAATTVTLAPAPANAADVYGAIAYSGNGSWGRSWDYPTRAAAEATAVKSCGYSDCKVLTSF TACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDTWACN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1813c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1269_MYCTU (P0A5E1)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: E70754 - RefSeq: NP_215785.1 - RefSeq: NP_335753.1 - EnsemblBacteria: EBMYCT00000001525 - EnsemblBacteria: EBMYCT00000072931 - GeneID: 887039 - GeneID: 924763 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1307 - KEGG: mtu:Rv1269c - TIGR: MT1307 - TubercuList: Rv1269c - GeneTree: EBGT00050000018502 - HOGENOM: HBG569594 - OMA: GRASHYP - ProtClustDB: CLSK791065 - InterPro: IPR006311
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12550; Mature: 12419
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS51318 TAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMITLRRRFAVAVAGVATAAATTVTLAPAPANAADVYGAIAYSGNGSWGRSWDYPTRA CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH AAEATAVKSCGYSDCKVLTSFTACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDT HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE WACN EECC >Mature Secondary Structure TTMITLRRRFAVAVAGVATAAATTVTLAPAPANAADVYGAIAYSGNGSWGRSWDYPTRA CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH AAEATAVKSCGYSDCKVLTSFTACGAVAANDRAYQGGVGPTLAAAMKDALTKLGGGYIDT HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE WACN EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036; 11681203