Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637196
Identifier: 121637196
GI number: 121637196
Start: 1444282
End: 1444980
Strand: Reverse
Name: 121637196
Synonym: BCG_1327c
Alternate gene names: NA
Gene position: 1444980-1444282 (Counterclockwise)
Preceding gene: 121637197
Following gene: 121637195
Centisome position: 33.03
GC content: 66.52
Gene sequence:
>699_bases ATGACGACCAGCAAAATCGCCACCGCCTTCAAGACCGCCACCTTCGCGCTGGCCGCCGGTGCCGTTGCACTGGGATTGGC CAGCCCCGCCGACGCAGCGGCGGGCACCATGTATGGCGACCCGGCAGCCGCCGCCAAGTACTGGCGCCAGCAGACATACG ACGACTGCGTCCTGATGTCGGCCGCGGACGTGATCGGTCAAGTGACCGGCAGGGAGCCTTCCGAGCGCGCCATCATCAAA GTGGCCCAGTCGACACCCAGCGTCGTGCACCCCGGGTCCATCTACACAAAGCCGGCCGACGCCGAGCACCCGAACTCGGG AATGGGTACCAGCGTGGCCGACATACCGACGCTGCTGGCGCATTACGGCGTCGACGCCGTTATCACCGACGAGGACCACG CCACAGCCACCGGAGTCGCCACCGGCATGGCCGCCCTCGAGCAGTATCTGGGCAGCGGGCACGCCGTGATCGTCAGCATC AACGCCGAGATGATCTGGGGCCAGCCCGTCGAGGAAACCGACAGTGCCGGCAACCCGCGGTCTGACCACGCCGTGGTGGT GACCGGTGTCGATACCGAAAACGGCATTGTTCACCTCAACGACAGCGGTACCCCCACGGGCCGCGACGAGCAGATCCCGA TGGAAACCTTCGTCGAGGCGTGGGCCACCAGCCACGACTTCATGGCCGTCACCACCTGA
Upstream 100 bases:
>100_bases TGCAGATCACTCCAAGAATTCCTAGAGATAACAAAAAGGTCACCATCGGAACCTTTTCTCAACATCCACTCCGCATAGCG GAACGAGAAAAGGACCGACG
Downstream 100 bases:
>100_bases ACCGCGCTCGAATGTCGATCACCACAGCGGGCAGCCACTCGTTGCAAGAACACCGGGTCGGCTGCCCGCCGATCGCATGT TTGGATGAGCACCAACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTTSKIATAFKTATFALAAGAVALGLASPADAAAGTMYGDPAAAAKYWRQQTYDDCVLMSAADVIGQVTGREPSERAIIK VAQSTPSVVHPGSIYTKPADAEHPNSGMGTSVADIPTLLAHYGVDAVITDEDHATATGVATGMAALEQYLGSGHAVIVSI NAEMIWGQPVEETDSAGNPRSDHAVVVTGVDTENGIVHLNDSGTPTGRDEQIPMETFVEAWATSHDFMAVTT
Sequences:
>Translated_232_residues MTTSKIATAFKTATFALAAGAVALGLASPADAAAGTMYGDPAAAAKYWRQQTYDDCVLMSAADVIGQVTGREPSERAIIK VAQSTPSVVHPGSIYTKPADAEHPNSGMGTSVADIPTLLAHYGVDAVITDEDHATATGVATGMAALEQYLGSGHAVIVSI NAEMIWGQPVEETDSAGNPRSDHAVVVTGVDTENGIVHLNDSGTPTGRDEQIPMETFVEAWATSHDFMAVTT >Mature_231_residues TTSKIATAFKTATFALAAGAVALGLASPADAAAGTMYGDPAAAAKYWRQQTYDDCVLMSAADVIGQVTGREPSERAIIKV AQSTPSVVHPGSIYTKPADAEHPNSGMGTSVADIPTLLAHYGVDAVITDEDHATATGVATGMAALEQYLGSGHAVIVSIN AEMIWGQPVEETDSAGNPRSDHAVVVTGVDTENGIVHLNDSGTPTGRDEQIPMETFVEAWATSHDFMAVTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1268_MYCTU (P64791)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: D70754 - RefSeq: NP_215784.1 - RefSeq: NP_335752.1 - ProteinModelPortal: P64791 - EnsemblBacteria: EBMYCT00000002665 - EnsemblBacteria: EBMYCT00000072339 - GeneID: 887033 - GeneID: 924764 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1306 - KEGG: mtu:Rv1268c - TIGR: MT1306 - TubercuList: Rv1268c - GeneTree: EBGT00050000015112 - HOGENOM: HBG564741 - OMA: TASEDIP - ProtClustDB: CLSK791064 - GO: GO:0006508 - InterPro: IPR000169
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23974; Mature: 23843
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSKIATAFKTATFALAAGAVALGLASPADAAAGTMYGDPAAAAKYWRQQTYDDCVLMS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH AADVIGQVTGREPSERAIIKVAQSTPSVVHPGSIYTKPADAEHPNSGMGTSVADIPTLLA HHHHHHHHCCCCCCCHHEEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHH HYGVDAVITDEDHATATGVATGMAALEQYLGSGHAVIVSINAEMIWGQPVEETDSAGNPR HCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCC SDHAVVVTGVDTENGIVHLNDSGTPTGRDEQIPMETFVEAWATSHDFMAVTT CCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure TTSKIATAFKTATFALAAGAVALGLASPADAAAGTMYGDPAAAAKYWRQQTYDDCVLMS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH AADVIGQVTGREPSERAIIKVAQSTPSVVHPGSIYTKPADAEHPNSGMGTSVADIPTLLA HHHHHHHHCCCCCCCHHEEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHH HYGVDAVITDEDHATATGVATGMAALEQYLGSGHAVIVSINAEMIWGQPVEETDSAGNPR HCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCC SDHAVVVTGVDTENGIVHLNDSGTPTGRDEQIPMETFVEAWATSHDFMAVTT CCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036