Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637156
Identifier: 121637156
GI number: 121637156
Start: 1400014
End: 1400547
Strand: Reverse
Name: 121637156
Synonym: BCG_1287c
Alternate gene names: NA
Gene position: 1400547-1400014 (Counterclockwise)
Preceding gene: 121637158
Following gene: 121637155
Centisome position: 32.02
GC content: 69.85
Gene sequence:
>534_bases TTGGACCATGCTCGAAATGTGCCAAGCGCAACCGGACCGCAGAGAAATCACCTCGCGCTCGCCGAGCCGGCCCATCGACC GAGCAGCCAGGCGCCGGTGATGTGGGCGCTGTCCGCGTCGCTGGGCTGGATACTCCCGGTGATCGCGCAGCTGGTGTGGT GGGCGGTGCATCCCCAGCCGCCCTGGCCGCACCTGGCCGCGGCCGCTCTCACCGCGGTGGCGATGGTGGTGCACATCGGG GTGGTCCCGCTCTGGCGTTACCGGGTACACCGTTGGGAGATCAGCCCGCAGGCCGTATTCACCCGCACCGGTTGGCTCGT GCAGGAGCGCCGCATCACACCGATTTCCCGGGTGCAGACCGTCGACACCTACCGCGGCCCGATGGACCGGCTGTTCGGGC TGGCCAACGTCACCGTAACCACGGCGTCCTCGGCGGGCGCGGTGCACATCGAGGCGTTGGACACCGACGTCGCCGATCGG GTGGTGGCGCAGCTGACCGACATCGCCGCGCTGCGCGGCGAGGACGCGACATGA
Upstream 100 bases:
>100_bases ACTCATCGCGCCTCCCCGGGGCAGGGTGAGTTGGCACGCATCTTGTTGAGCGCTAGCTCAAACGATAACCACGACCCCCG ATCACTGTGTTCGGTTTCCG
Downstream 100 bases:
>100_bases CCGACCGGCCACACGATTGGCACCGCCTCAGCCCGCGGATGCTGCTGGTGCATCCGGTGCACGAGATGCTGCGCCAGCTC CCGGTACTCATCGGGTCCGT
Product: putative transmembrane protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane Flanked Domain-Containing Protein; Integral Membrane Protein; Membrane-Flanked Domain; Membrane-Flanked Domain Containing Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQLVWWAVHPQPPWPHLAAAALTAVAMVVHIG VVPLWRYRVHRWEISPQAVFTRTGWLVQERRITPISRVQTVDTYRGPMDRLFGLANVTVTTASSAGAVHIEALDTDVADR VVAQLTDIAALRGEDAT
Sequences:
>Translated_177_residues MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQLVWWAVHPQPPWPHLAAAALTAVAMVVHIG VVPLWRYRVHRWEISPQAVFTRTGWLVQERRITPISRVQTVDTYRGPMDRLFGLANVTVTTASSAGAVHIEALDTDVADR VVAQLTDIAALRGEDAT >Mature_177_residues MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQLVWWAVHPQPPWPHLAAAALTAVAMVVHIG VVPLWRYRVHRWEISPQAVFTRTGWLVQERRITPISRVQTVDTYRGPMDRLFGLANVTVTTASSAGAVHIEALDTDVADR VVAQLTDIAALRGEDAT
Specific function: Unknown
COG id: COG3402
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19388; Mature: 19388
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQLVWWAVHPQP CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PWPHLAAAALTAVAMVVHIGVVPLWRYRVHRWEISPQAVFTRTGWLVQERRITPISRVQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHEEEECCCEEECCCCCHHHHHHH VDTYRGPMDRLFGLANVTVTTASSAGAVHIEALDTDVADRVVAQLTDIAALRGEDAT HHHHCCHHHHHHHHHCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQLVWWAVHPQP CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PWPHLAAAALTAVAMVVHIGVVPLWRYRVHRWEISPQAVFTRTGWLVQERRITPISRVQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHEEEECCCEEECCCCCHHHHHHH VDTYRGPMDRLFGLANVTVTTASSAGAVHIEALDTDVADRVVAQLTDIAALRGEDAT HHHHCCHHHHHHHHHCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA