Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637155
Identifier: 121637155
GI number: 121637155
Start: 1398554
End: 1400017
Strand: Reverse
Name: 121637155
Synonym: BCG_1286c
Alternate gene names: NA
Gene position: 1400017-1398554 (Counterclockwise)
Preceding gene: 121637156
Following gene: 121637154
Centisome position: 32.0
GC content: 70.77
Gene sequence:
>1464_bases ATGACCGACCGGCCACACGATTGGCACCGCCTCAGCCCGCGGATGCTGCTGGTGCATCCGGTGCACGAGATGCTGCGCCA GCTCCCGGTACTCATCGGGTCCGTGGTGCTGGGGTCGGCAACCGGCAACCCGGTCTGGCCGCTGGCGGCGCTCGGCGTGA CGGTCGTATTCGGCGTGCTGCGTTGGTTTTTCACCACCTACCGCATCGACGACGAAAACGTGTCGCTGCGTACCGGCATA CTCAGCCGGCGCGCGGTCTCCGTGCCGCGCAACCGGATTCGCTCGGTGCAGACCGAGGCGCGGCTGTTGCACCGGCTGTT GGGGTTGACGGTGCTGCGGGTGGGCACCGGCCAGGAGGCCCGCGGTGAGGCCGCCTTCGAACTGGACGCGGTCGACTCGG CACGGGTGCCCAGGCTGCGCGCGCTGCTGCTGGCCGAGTCGCTGGCACCCGTCGAGCCGACCGGTCGGGTGCTGGCCCGG TGGCAGTCGTCGTGGTTGCGGTATGCGCCGCTGAGCTTTTCGGGCCTGGTGATGATCGGGGCGGTGATCGGGCTTGGCTA CCAAACGGGACTGGCCGTGCGACTCCCGGAATCCGGTTTCGCCAGGTCCGCGGTGGACGCCGCGCAACGCGCCGGGGTGG TACTGGTGGTGGCGGTCACTGTGCTGCTGGTGGTGGGTGTATCGGCACTGTTGGCGGTGCTGTTCTCCTGGTTGACCTAC GGCAATCTGCTGCTGCGCCGCGGCGGCAGCGGTCAAGAAGGGGTGCTACACCTGCGGCACGGGCTGCTGCGGGTGCGCGA GCACACCTACGACATGCGCCGGCTGCGTGGCGCCACCTTGCGTGAACCACTGCTGGTGCGGTTATTGCGCGGTGCTCGGC TGGACGCAGTGATGACCGGCGTGCATGGCGAGGGCCAGTCGTCGATGCTGCTGCCACCATGTCCGTTCGAGACCGCGACG GCCGTGCTGACCGACCTGATCGACAACACCGACGCGGCAGCGGGGCCGCTGCGCCGGCACGGCCCGGCCGCCGCCCGGCG CAGGTGGACCCGGGCGCTGTTGGTCCCGACGCTGGCCGGAGTTGCGCTGATCGCAGCGGCGCCGATTCTCGGCGTGCCGG GGTGGGCGTGGACACTGTGGGCGGTGTTGACCGCGGGTTGCGCTGGGCTGGCCGTCGATCGGGTCCGATCACTCGGGCAC CGCGTCGCCGACGGCTGGTTGGTTGCGCGCGCCGGCAGCCTACAGCGTCGCCGCGATTGCATCGCCTGCACCGGCATCAT CGGCTGGACGGTGCGCCAGACACTGTTCCAGCGGAGGGCGGGGGTGGCGACGCTCGTGGCGGCCACCGCGGCGGGCCGCA AGGGTTATCAGGTGCTCGATGTGCCCGCGGAGCTGGCGTGGTCGGTGGCCGGCGCCGCGTCGCCCTGGGTGGCCGACAGT GTGTGGTTGCGCCACGGATCTTGA
Upstream 100 bases:
>100_bases CGGCGGGCGCGGTGCACATCGAGGCGTTGGACACCGACGTCGCCGATCGGGTGGTGGCGCAGCTGACCGACATCGCCGCG CTGCGCGGCGAGGACGCGAC
Downstream 100 bases:
>100_bases GGGATCCTGAGCCAGGATGAACCTCACCGTCGAGATCGACGTCAGCGCGATGCTCACTGGGGTTTTTCCGCGCTGGTGTC GATGTCGACGGTCTAACTGA
Product: putative transmembrane protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane Flanked Domain-Containing Protein; Integral Membrane Protein; Transmembrane Protein; Membrane-Flanked Domain
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTYRIDDENVSLRTGI LSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLAR WQSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETAT AVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGH RVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS VWLRHGS
Sequences:
>Translated_487_residues MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTYRIDDENVSLRTGI LSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLAR WQSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETAT AVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGH RVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS VWLRHGS >Mature_486_residues TDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTYRIDDENVSLRTGIL SRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARW QSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYG NLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATA VLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHR VADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADSV WLRHGS
Specific function: Unknown
COG id: COG3428
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52571; Mature: 52440
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL CCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA HHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHH AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY HHHHCCHHCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCC VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH IACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCHHHH VWLRHGS HHHCCCC >Mature Secondary Structure TDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL CCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA HHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHH AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY HHHHCCHHCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCC VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH IACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCHHHH VWLRHGS HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA