Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is bpoB
Identifier: 121637055
GI number: 121637055
Start: 1277559
End: 1278467
Strand: Reverse
Name: bpoB
Synonym: BCG_1184c
Alternate gene names: NA
Gene position: 1278467-1277559 (Counterclockwise)
Preceding gene: 121637058
Following gene: 121637052
Centisome position: 29.23
GC content: 66.78
Gene sequence:
>909_bases ATGACGATTTGGCGCGTGCCCAGCAAGGTAACGTCAGGACCCGTGAGCGCCGTGAGCAGCAGTCCCCAAGCGGTCGCGTT TTCCGGTGCTCGTGGGATTACCCTGGTCGCCGACGAGTGGAATCGGGGCGCCGCAGCGGCCGATCGGCCGACGATCCTGA TGTTGCACGGTGGCGGCCAAAACCGGTTTTCCTGGAAAAACACCGGCCAGATCCTGGCCGACGAGGGGCACCACGTCGTT GCGCTGGACACCCGCGGACCCGGTGACAGCGACCGCGCTCCCGGCGCCGACTATGCCGTGGAGACCCCGACCACCGATGT GCTACACGTCGTCGAGGCGATCGGCCGCCGTGTGGTGGTGGTCGAGGCCAGCATGGGCGGACTGACTGGCATCCTGGTCG CCGAGCGCGCCGGTCCGCAGACGGTGAACGGACTGGTATTGGTCGACGTGGTGCCGCGTTACGAGAAGGAGGGCAACGCC CGTATCCGGGACTTCATGCTGGGCAACATCGACGGCTTCGGTTCGCTCGAGGAAGCCGCCGACGCAGTCGCCGAGTATCT GCCGCACCGCGACAAGCCGCGCAGTCCCGAGGGCCTGAAGAGGAATCTGCGCCTGCGAGACGGACGCTGGCACTGGCACT GGGATCCGGCCATGATGACCGCGCCGGGGCACGACCCGCAGCTGCGCACCGAGAACTTCGAACGGGCTGCCATGGGCCTG ACGATCCCGGTCCTGTTGATTCGCGGAAAGCTGTCCGACGTGGTCAGTTCCGACGGTGCCCGGGACTTCCTGGCCAAGGT GCCCAACGCGGAGTTCGTCGAATTGTCCAACGCGGGGCGCACCGCCGCCGGCGACGACAACGACGCGTTCACCGACGTCG TGGTGGACTTCGTCAGGCGACTTAGTTAG
Upstream 100 bases:
>100_bases TCCCGTTCGCCGCGTCCAGCCCGCATGGTCCAACGTAACCGGCGGAACCCAAGAGGCCAGTAGCTAGGGCACCTTGATCA CCGCATCCTCCAGGTCGGCG
Downstream 100 bases:
>100_bases CCGGTTTCTCGGCGTGTCCGCCGAACTGCTTGCGCATCGCCGACAGCGCCTTGTTGGCGAAGTCGTCGAGGTCACGCGAG GCGAAGCGGGACTGCAGCGC
Product: putative peroxidase bpoB (non-haem peroxidase)
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Peroxidase BpoA; Peroxidase BpoB; Peroxiredoxin; Non-Haem Bromoperoxidase; Hydrolase Of Alpha/Beta Fold Superfamily; Alpha/Beta Family Hydrolase; Non-Heme Peroxidase; Alpha/Beta Hydrolase Fold Family
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTIWRVPSKVTSGPVSAVSSSPQAVAFSGARGITLVADEWNRGAAAADRPTILMLHGGGQNRFSWKNTGQILADEGHHVV ALDTRGPGDSDRAPGADYAVETPTTDVLHVVEAIGRRVVVVEASMGGLTGILVAERAGPQTVNGLVLVDVVPRYEKEGNA RIRDFMLGNIDGFGSLEEAADAVAEYLPHRDKPRSPEGLKRNLRLRDGRWHWHWDPAMMTAPGHDPQLRTENFERAAMGL TIPVLLIRGKLSDVVSSDGARDFLAKVPNAEFVELSNAGRTAAGDDNDAFTDVVVDFVRRLS
Sequences:
>Translated_302_residues MTIWRVPSKVTSGPVSAVSSSPQAVAFSGARGITLVADEWNRGAAAADRPTILMLHGGGQNRFSWKNTGQILADEGHHVV ALDTRGPGDSDRAPGADYAVETPTTDVLHVVEAIGRRVVVVEASMGGLTGILVAERAGPQTVNGLVLVDVVPRYEKEGNA RIRDFMLGNIDGFGSLEEAADAVAEYLPHRDKPRSPEGLKRNLRLRDGRWHWHWDPAMMTAPGHDPQLRTENFERAAMGL TIPVLLIRGKLSDVVSSDGARDFLAKVPNAEFVELSNAGRTAAGDDNDAFTDVVVDFVRRLS >Mature_301_residues TIWRVPSKVTSGPVSAVSSSPQAVAFSGARGITLVADEWNRGAAAADRPTILMLHGGGQNRFSWKNTGQILADEGHHVVA LDTRGPGDSDRAPGADYAVETPTTDVLHVVEAIGRRVVVVEASMGGLTGILVAERAGPQTVNGLVLVDVVPRYEKEGNAR IRDFMLGNIDGFGSLEEAADAVAEYLPHRDKPRSPEGLKRNLRLRDGRWHWHWDPAMMTAPGHDPQLRTENFERAAMGLT IPVLLIRGKLSDVVSSDGARDFLAKVPNAEFVELSNAGRTAAGDDNDAFTDVVVDFVRRLS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32544; Mature: 32413
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWRVPSKVTSGPVSAVSSSPQAVAFSGARGITLVADEWNRGAAAADRPTILMLHGGGQ CCEEECCCCCCCCCHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC NRFSWKNTGQILADEGHHVVALDTRGPGDSDRAPGADYAVETPTTDVLHVVEAIGRRVVV CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEE VEASMGGLTGILVAERAGPQTVNGLVLVDVVPRYEKEGNARIRDFMLGNIDGFGSLEEAA EEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHH DAVAEYLPHRDKPRSPEGLKRNLRLRDGRWHWHWDPAMMTAPGHDPQLRTENFERAAMGL HHHHHHCCCCCCCCCCHHHHCCCEEECCEEEEEECCEEEECCCCCCCCCCCCHHHHHHCC TIPVLLIRGKLSDVVSSDGARDFLAKVPNAEFVELSNAGRTAAGDDNDAFTDVVVDFVRR EEEEHEEHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH LS CC >Mature Secondary Structure TIWRVPSKVTSGPVSAVSSSPQAVAFSGARGITLVADEWNRGAAAADRPTILMLHGGGQ CEEECCCCCCCCCHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC NRFSWKNTGQILADEGHHVVALDTRGPGDSDRAPGADYAVETPTTDVLHVVEAIGRRVVV CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEE VEASMGGLTGILVAERAGPQTVNGLVLVDVVPRYEKEGNARIRDFMLGNIDGFGSLEEAA EEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHH DAVAEYLPHRDKPRSPEGLKRNLRLRDGRWHWHWDPAMMTAPGHDPQLRTENFERAAMGL HHHHHHCCCCCCCCCCHHHHCCCEEECCEEEEEECCEEEECCCCCCCCCCCCHHHHHHCC TIPVLLIRGKLSDVVSSDGARDFLAKVPNAEFVELSNAGRTAAGDDNDAFTDVVVDFVRR EEEEHEEHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH LS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA