Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637004
Identifier: 121637004
GI number: 121637004
Start: 1230725
End: 1231669
Strand: Reverse
Name: 121637004
Synonym: BCG_1133c
Alternate gene names: NA
Gene position: 1231669-1230725 (Counterclockwise)
Preceding gene: 121637009
Following gene: 121637003
Centisome position: 28.16
GC content: 68.68
Gene sequence:
>945_bases GTGCCACGGCGTTCCACGATCGCTTTGGCCACCGCGGGTGCACTCGCCTCGACGGGCACGGCCTATCTGGGCGCACGCAA CCTGCTGGTCGGTCAGGCGACCCACGCGCGCACGGTAATTCCCAAATCCTTCGACGCACCGCCCCGCGCCGACGGCGTAT ACACCCGCGGCGGTGGGCCCGTGCAACGGTGGCGACGCGAAGTGCCCTTCGACGTGCACCTGATGATCTTTGGTGACTCG ACGGCGACGGGATACGGCTGCGCTAGCGCTGAGGAAGTACCGGGCGTGTTGATCGCCCGCGGACTCGCCGAGCAGACCGG CAAGCGGATCCGGCTGAGCACCAAAGCCATCGTCGGCGCCACCTCGAAAGGCGTCTGCGGTCAAGTCGATGCGATGTTCG TGGTCGGTCCGCCGCCGGATGCGGCGGTAATCATGATTGGCGCCAACGACATAACGGCACTCAACGGCATTGGCCCCTCT GCGCAACGGCTGGCCGACTGCGTACGCAGGTTGCGCACCCGCGGAGCGGTAGTGGTGGTCGGCACTTGCCCCGACCTCGG CGTCATTACCGCCATCCCGCAGCCGCTGCGCGCGCTAGCGCACACCCGTGGTGTGCGGCTGGCCCGCGCCCAAACGGCAG CCGTCAAGGCGGCCGGTGGGGTGCCGGTGCCGCTAGGACATCTACTGGCTCCCAAATTCCGGGCAATGCCCGAGCTGATG TTCTCCGCCGACCGCTACCACCCGTCGGCGCCCGCGTACGCCCTGGCGGCCGATCTGTTGTTCCTTGCGCTGCGCGATGC GCTGACCGAAAAGCTCGATATCCCAATTCATGAAACGCCGTCCCGGCCTGGAACGGCCACCCTCGAGCCGGGCCACACGC GACACAGCATGATGTCGCGGCTGCGGCGGCCCCGGCCGGCCCGGGCCGTGCCGACCGGTGGGTAG
Upstream 100 bases:
>100_bases CTGATTCGATACCACATTTGGTCCACACCGTGACGGGTTTGTTCGTCAGCTACCCACGAAATCGGCACAACCGTCCTAAA CTGATCCCGTGAGCATGCGC
Downstream 100 bases:
>100_bases CGACTACATTTGACCTAAACTTCACCACGTCTTGTCCATGCCGGGAGCCGTCATGCCAGAAGCTGTCATCGTCTCGACTG CCCGCTCGCCGATTGGCCGG
Product: exported protein
Products: NA
Alternate protein names: GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic Protein G-D-S-L Family; Lipolytic G-D-S-L; Lipolytic; Conserved Exported Protein; Lipid Hydrolase; SGNH Hydrolase; Lipase; LOW QUALITY PROTEIN Secreted Protein; Lysophospholipase L1-Like Esterase
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPRRSTIALATAGALASTGTAYLGARNLLVGQATHARTVIPKSFDAPPRADGVYTRGGGPVQRWRREVPFDVHLMIFGDS TATGYGCASAEEVPGVLIARGLAEQTGKRIRLSTKAIVGATSKGVCGQVDAMFVVGPPPDAAVIMIGANDITALNGIGPS AQRLADCVRRLRTRGAVVVVGTCPDLGVITAIPQPLRALAHTRGVRLARAQTAAVKAAGGVPVPLGHLLAPKFRAMPELM FSADRYHPSAPAYALAADLLFLALRDALTEKLDIPIHETPSRPGTATLEPGHTRHSMMSRLRRPRPARAVPTGG
Sequences:
>Translated_314_residues MPRRSTIALATAGALASTGTAYLGARNLLVGQATHARTVIPKSFDAPPRADGVYTRGGGPVQRWRREVPFDVHLMIFGDS TATGYGCASAEEVPGVLIARGLAEQTGKRIRLSTKAIVGATSKGVCGQVDAMFVVGPPPDAAVIMIGANDITALNGIGPS AQRLADCVRRLRTRGAVVVVGTCPDLGVITAIPQPLRALAHTRGVRLARAQTAAVKAAGGVPVPLGHLLAPKFRAMPELM FSADRYHPSAPAYALAADLLFLALRDALTEKLDIPIHETPSRPGTATLEPGHTRHSMMSRLRRPRPARAVPTGG >Mature_313_residues PRRSTIALATAGALASTGTAYLGARNLLVGQATHARTVIPKSFDAPPRADGVYTRGGGPVQRWRREVPFDVHLMIFGDST ATGYGCASAEEVPGVLIARGLAEQTGKRIRLSTKAIVGATSKGVCGQVDAMFVVGPPPDAAVIMIGANDITALNGIGPSA QRLADCVRRLRTRGAVVVVGTCPDLGVITAIPQPLRALAHTRGVRLARAQTAAVKAAGGVPVPLGHLLAPKFRAMPELMF SADRYHPSAPAYALAADLLFLALRDALTEKLDIPIHETPSRPGTATLEPGHTRHSMMSRLRRPRPARAVPTGG
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32880; Mature: 32748
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRSTIALATAGALASTGTAYLGARNLLVGQATHARTVIPKSFDAPPRADGVYTRGGGP CCCCCEEEEEECCHHHHCCCHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCEEECCCCH VQRWRREVPFDVHLMIFGDSTATGYGCASAEEVPGVLIARGLAEQTGKRIRLSTKAIVGA HHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEEHHEEECC TSKGVCGQVDAMFVVGPPPDAAVIMIGANDITALNGIGPSAQRLADCVRRLRTRGAVVVV CCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEE GTCPDLGVITAIPQPLRALAHTRGVRLARAQTAAVKAAGGVPVPLGHLLAPKFRAMPELM ECCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH FSADRYHPSAPAYALAADLLFLALRDALTEKLDIPIHETPSRPGTATLEPGHTRHSMMSR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH LRRPRPARAVPTGG HCCCCCCCCCCCCC >Mature Secondary Structure PRRSTIALATAGALASTGTAYLGARNLLVGQATHARTVIPKSFDAPPRADGVYTRGGGP CCCCEEEEEECCHHHHCCCHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCEEECCCCH VQRWRREVPFDVHLMIFGDSTATGYGCASAEEVPGVLIARGLAEQTGKRIRLSTKAIVGA HHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEEHHEEECC TSKGVCGQVDAMFVVGPPPDAAVIMIGANDITALNGIGPSAQRLADCVRRLRTRGAVVVV CCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEE GTCPDLGVITAIPQPLRALAHTRGVRLARAQTAAVKAAGGVPVPLGHLLAPKFRAMPELM ECCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH FSADRYHPSAPAYALAADLLFLALRDALTEKLDIPIHETPSRPGTATLEPGHTRHSMMSR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH LRRPRPARAVPTGG HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA