Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636972
Identifier: 121636972
GI number: 121636972
Start: 1196267
End: 1197292
Strand: Reverse
Name: 121636972
Synonym: BCG_1101c
Alternate gene names: NA
Gene position: 1197292-1196267 (Counterclockwise)
Preceding gene: 121636975
Following gene: 121636971
Centisome position: 27.37
GC content: 64.23
Gene sequence:
>1026_bases ATGTGCGCCCATCAATTCTTCGGGCTGGTCCACAACCCGGTGGTTGCGGCGGCGATCGGCAAACCCGAACCACCACCGGT TGACTCGGATATCGGTCTGCCGACGACGGTGCCCTTCGAACCGTGGTCGGTCGCAGATTTCTCCCGATACCTGAGCACCC TCGGCCTGCCCGCCGCGGGCGACGCGGTGACCCTCCACCGCATCCTCAGCTCGATGGAACGCGCGGGACTTCTGCTGCCG CTCGGTTGGGACCCGCGATTGCCAGTCATGGGGCAGAAGTACATCTCGCAGGGGACGATATCGAAGGGACAGCGTGGCGG CAACCTCTGGTTGTCCGAGGTGTTCGGTGCCGAGCTCATCATCCCGAGCTACAACGCGGTGACCGTTCAACTCGCCGGTC ACGACGACGCTGGCAATCCGGTGGATAGTTGGGGAACCGGCCTCGTCGTCGACCACAATCACGTCATCACCAACAAACAT GTCGTGACCGGGCTCGCGGGCACGAGCGCAGGTCTGTCCGTCTATCCGTCAAGCAACCACGCCGAAGCCGAGTTGGTGAA CTTCTCGGGCACCGCTCACCCGCACCCCACGCTCGACGTCGCAGTAATCAAATTCGAGATGCCCGAAGGCAAGTACATCC CGCGGCTTGGCGGCATGGCGTTCCGTGATCCCGACTGGGCGGATGAGGTCTACGTGTTCGGTTACCCGCGGGTGCCGATG ACTGCGGAGATGGCGATCACGGTGCAGCGTGGCGAGGTGGTCAACCCGGCCGCGACGACTATCCCCGGCCGGCAGAAGAT TTTCCTCTACTCGGCAATCGCGCGGCCGGGCAACAGCGGCGGTCCGATCGTTGCGCAAGACGGCCGTGTGATCGGCCTCG TGGTCGAGGACTCTGCGGAAGCACCGTCGACGGGCACCGGACCGAACGCGGCACCCTTCTATCGCGGCATCCCGTCGAGC GAAGTGATCCGAGCACTCGACGAACTCGACTTCGGCGGCATCGTGGAGATGGACACCCTCCCATAG
Upstream 100 bases:
>100_bases GGCAGAGGTGACGGCGGATGGCGCGGAAAGCACCTGACCGCGACAGCTCACGGCGGCCGACCTGAAGCCCGGGACTCCTG CGTGGCGTGTGAACGTGGCG
Downstream 100 bases:
>100_bases GCACAACCCGGGACGTATCAACACGCACCAAACCCTTCAATCCGGTGGTAGTGGGTCAGTTTGATTTTCGCCGAACTCGA CGCGGCGTAGGCTCGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MCAHQFFGLVHNPVVAAAIGKPEPPPVDSDIGLPTTVPFEPWSVADFSRYLSTLGLPAAGDAVTLHRILSSMERAGLLLP LGWDPRLPVMGQKYISQGTISKGQRGGNLWLSEVFGAELIIPSYNAVTVQLAGHDDAGNPVDSWGTGLVVDHNHVITNKH VVTGLAGTSAGLSVYPSSNHAEAELVNFSGTAHPHPTLDVAVIKFEMPEGKYIPRLGGMAFRDPDWADEVYVFGYPRVPM TAEMAITVQRGEVVNPAATTIPGRQKIFLYSAIARPGNSGGPIVAQDGRVIGLVVEDSAEAPSTGTGPNAAPFYRGIPSS EVIRALDELDFGGIVEMDTLP
Sequences:
>Translated_341_residues MCAHQFFGLVHNPVVAAAIGKPEPPPVDSDIGLPTTVPFEPWSVADFSRYLSTLGLPAAGDAVTLHRILSSMERAGLLLP LGWDPRLPVMGQKYISQGTISKGQRGGNLWLSEVFGAELIIPSYNAVTVQLAGHDDAGNPVDSWGTGLVVDHNHVITNKH VVTGLAGTSAGLSVYPSSNHAEAELVNFSGTAHPHPTLDVAVIKFEMPEGKYIPRLGGMAFRDPDWADEVYVFGYPRVPM TAEMAITVQRGEVVNPAATTIPGRQKIFLYSAIARPGNSGGPIVAQDGRVIGLVVEDSAEAPSTGTGPNAAPFYRGIPSS EVIRALDELDFGGIVEMDTLP >Mature_341_residues MCAHQFFGLVHNPVVAAAIGKPEPPPVDSDIGLPTTVPFEPWSVADFSRYLSTLGLPAAGDAVTLHRILSSMERAGLLLP LGWDPRLPVMGQKYISQGTISKGQRGGNLWLSEVFGAELIIPSYNAVTVQLAGHDDAGNPVDSWGTGLVVDHNHVITNKH VVTGLAGTSAGLSVYPSSNHAEAELVNFSGTAHPHPTLDVAVIKFEMPEGKYIPRLGGMAFRDPDWADEVYVFGYPRVPM TAEMAITVQRGEVVNPAATTIPGRQKIFLYSAIARPGNSGGPIVAQDGRVIGLVVEDSAEAPSTGTGPNAAPFYRGIPSS EVIRALDELDFGGIVEMDTLP
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36119; Mature: 36119
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAHQFFGLVHNPVVAAAIGKPEPPPVDSDIGLPTTVPFEPWSVADFSRYLSTLGLPAAG CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC DAVTLHRILSSMERAGLLLPLGWDPRLPVMGQKYISQGTISKGQRGGNLWLSEVFGAELI CHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEHHHHCCCEEE IPSYNAVTVQLAGHDDAGNPVDSWGTGLVVDHNHVITNKHVVTGLAGTSAGLSVYPSSNH EECCCEEEEEEECCCCCCCCCHHCCCEEEEECCEEEECCEEEEEECCCCCCEEECCCCCC AEAELVNFSGTAHPHPTLDVAVIKFEMPEGKYIPRLGGMAFRDPDWADEVYVFGYPRVPM CCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TAEMAITVQRGEVVNPAATTIPGRQKIFLYSAIARPGNSGGPIVAQDGRVIGLVVEDSAE EEEEEEEEECCCEECCHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCEEEEEEEECCCC APSTGTGPNAAPFYRGIPSSEVIRALDELDFGGIVEMDTLP CCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCEEEECCCC >Mature Secondary Structure MCAHQFFGLVHNPVVAAAIGKPEPPPVDSDIGLPTTVPFEPWSVADFSRYLSTLGLPAAG CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC DAVTLHRILSSMERAGLLLPLGWDPRLPVMGQKYISQGTISKGQRGGNLWLSEVFGAELI CHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEHHHHCCCEEE IPSYNAVTVQLAGHDDAGNPVDSWGTGLVVDHNHVITNKHVVTGLAGTSAGLSVYPSSNH EECCCEEEEEEECCCCCCCCCHHCCCEEEEECCEEEECCEEEEEECCCCCCEEECCCCCC AEAELVNFSGTAHPHPTLDVAVIKFEMPEGKYIPRLGGMAFRDPDWADEVYVFGYPRVPM CCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TAEMAITVQRGEVVNPAATTIPGRQKIFLYSAIARPGNSGGPIVAQDGRVIGLVVEDSAE EEEEEEEEECCCEECCHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCEEEEEEEECCCC APSTGTGPNAAPFYRGIPSSEVIRALDELDFGGIVEMDTLP CCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA