Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636971
Identifier: 121636971
GI number: 121636971
Start: 1195577
End: 1195984
Strand: Reverse
Name: 121636971
Synonym: BCG_1100c
Alternate gene names: NA
Gene position: 1195984-1195577 (Counterclockwise)
Preceding gene: 121636972
Following gene: 121636970
Centisome position: 27.34
GC content: 64.22
Gene sequence:
>408_bases GTGACGCGAGTGGGTGTGATTTCGGACGAGTTCTGGGCCGTGGTCGAGCCGTTGATGCCGTCGCATGAGGGCAAGCCCGG CAGACGGTTTAGCGATCACCGGCTTATCCTGGAAGGGATCGCGTGGCGGTTCCGTACGGGAAGTCCGTGGCGGGACCTGC CCGCTGAGTTCGGGCCGTGGCAAACGGTGTGGAAGCGCCATCACCGTTGGTCGCTGGATGGTACCTGCGACGAGGTGTTC GCCCACGTTGCCGCGGTGTTCGGGGTGGACGCTGAGGTGGCCGAGGATATCGAGAAGCTGCTGTCGGTGGATTCCACGAA CGTGCGGGCACACCAGCATTCGGCGGGCGCCTGCTCGGACACGCTCGCCACAGGGGGCACTGTCGAATTACAAGAAATCC GCCGATGA
Upstream 100 bases:
>100_bases CATAGGAGATGCGCCGAACAGGCCAAAGTACTACCGCTGCAGCCCGCGCCTAGGGCGTGTCTCCCAAATTTTTAGGTTAC TGGCCAGCGAGGATTGGCCG
Downstream 100 bases:
>100_bases ACCCGACGATCATGCGATCGGCCGCTCGCGCGGCGGGCTGACCACCAAGATCCATGCCCTGACCGATCAGCGCGAAGCCC CGGTGCGGATCCGGTTGACC
Product: putative IS like-2 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVF AHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVELQEIRR
Sequences:
>Translated_135_residues MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVF AHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVELQEIRR >Mature_134_residues TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDEVFA HVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVELQEIRR
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15189; Mature: 15058
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH TLATGGTVELQEIRR HHCCCCCEEHHHHCC >Mature Secondary Structure TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH TLATGGTVELQEIRR HHCCCCCEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]