Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is ygfA [C]
Identifier: 121636919
GI number: 121636919
Start: 1139067
End: 1139660
Strand: Reverse
Name: ygfA [C]
Synonym: BCG_1047c
Alternate gene names: 121636919
Gene position: 1139660-1139067 (Counterclockwise)
Preceding gene: 121636929
Following gene: 121636918
Centisome position: 26.05
GC content: 71.21
Gene sequence:
>594_bases ATGGCGATCGCGAGCAAGTCGGCGTTGCGCGACCAGCTCCTGGCGGCCCGACGCCGCGTTGCCGACGACGTGCGCGCCGC CGAGGCCCGGATGTTGCGTGGACACCTGGAGCGCATGGTCACCAGCGACAGCACCGTCTGCGCGTATGTGCCGGTAGGCG GCGAGCCGGGGTCAATCGAGATGTTGGATGTGTTGCTGCGCCGCGCGGGGCGAGTGCTGTTGCCGGTGGCGCGCACCGCC GGCGGTGACCTCCCGTTGCCGTTGCGGTGGGGCGAGTACCGTGCCGGCGGACTCGCGCGCGCACGCTGGGGACTGCTCGA ACCACCCGAACCTTGGCTGCCGGAAGCCGCGCTGGCGCAGGCCAGCTTGGTGCTGGTGCCGGCGCTGGCTGTCGACCGCC AGAGCGTGCGACTGGGCCGAGGTCGCGGCTTCTACGATCGCTCGCTGCGGTGCCGCGACCCGCACGCTCGTCTAGTCGCG GTGGTGCGCACTGTCGAACTGGTCGACGTGTTGCCGTCGGAGCCGCACGACGTACCCATGACTCATGCGCTCACACCGGA GCGCGGGCTGATCGCGCTGCCGTGCGGGGAATGA
Upstream 100 bases:
>100_bases CGTTCACACGATAACCCGCAGCGTGCTGATTGCCCGCCTCTTCGTTGGCGCTGTCCCGGCGCTCGCGCGGGACGGCCGGG GCTGTGTCATCGTTGAGGAC
Downstream 100 bases:
>100_bases CGGAACTCACCTAGCGGTTCTAGCACTTGAGACGGTAGAGTGCTAACGCCGAGTGACATTTCCGGAGGTTCTTGTGCCAA CCTACAGCTACGAGTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: 5 10-Methenyltetrahydrofolate Synthetase; 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; 5-Formyltetrahydrofolate Cyclo-Ligase-Like Protein; Ligase
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTA GGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVA VVRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE
Sequences:
>Translated_197_residues MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTA GGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVA VVRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE >Mature_196_residues AIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTAG GDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAV VRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21425; Mature: 21294
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH MLDVLLRRAGRVLLPVARTAGGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQ HHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH ASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAVVRTVELVDVLPSEPHDVPM HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC THALTPERGLIALPCGE EECCCCCCCEEEECCCC >Mature Secondary Structure AIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH MLDVLLRRAGRVLLPVARTAGGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQ HHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH ASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAVVRTVELVDVLPSEPHDVPM HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC THALTPERGLIALPCGE EECCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA