Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

Click here to switch to the map view.

The map label for this gene is ygfA [C]

Identifier: 121636919

GI number: 121636919

Start: 1139067

End: 1139660

Strand: Reverse

Name: ygfA [C]

Synonym: BCG_1047c

Alternate gene names: 121636919

Gene position: 1139660-1139067 (Counterclockwise)

Preceding gene: 121636929

Following gene: 121636918

Centisome position: 26.05

GC content: 71.21

Gene sequence:

>594_bases
ATGGCGATCGCGAGCAAGTCGGCGTTGCGCGACCAGCTCCTGGCGGCCCGACGCCGCGTTGCCGACGACGTGCGCGCCGC
CGAGGCCCGGATGTTGCGTGGACACCTGGAGCGCATGGTCACCAGCGACAGCACCGTCTGCGCGTATGTGCCGGTAGGCG
GCGAGCCGGGGTCAATCGAGATGTTGGATGTGTTGCTGCGCCGCGCGGGGCGAGTGCTGTTGCCGGTGGCGCGCACCGCC
GGCGGTGACCTCCCGTTGCCGTTGCGGTGGGGCGAGTACCGTGCCGGCGGACTCGCGCGCGCACGCTGGGGACTGCTCGA
ACCACCCGAACCTTGGCTGCCGGAAGCCGCGCTGGCGCAGGCCAGCTTGGTGCTGGTGCCGGCGCTGGCTGTCGACCGCC
AGAGCGTGCGACTGGGCCGAGGTCGCGGCTTCTACGATCGCTCGCTGCGGTGCCGCGACCCGCACGCTCGTCTAGTCGCG
GTGGTGCGCACTGTCGAACTGGTCGACGTGTTGCCGTCGGAGCCGCACGACGTACCCATGACTCATGCGCTCACACCGGA
GCGCGGGCTGATCGCGCTGCCGTGCGGGGAATGA

Upstream 100 bases:

>100_bases
CGTTCACACGATAACCCGCAGCGTGCTGATTGCCCGCCTCTTCGTTGGCGCTGTCCCGGCGCTCGCGCGGGACGGCCGGG
GCTGTGTCATCGTTGAGGAC

Downstream 100 bases:

>100_bases
CGGAACTCACCTAGCGGTTCTAGCACTTGAGACGGTAGAGTGCTAACGCCGAGTGACATTTCCGGAGGTTCTTGTGCCAA
CCTACAGCTACGAGTGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: 5 10-Methenyltetrahydrofolate Synthetase; 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; 5-Formyltetrahydrofolate Cyclo-Ligase-Like Protein; Ligase

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTA
GGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVA
VVRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE

Sequences:

>Translated_197_residues
MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTA
GGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVA
VVRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE
>Mature_196_residues
AIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIEMLDVLLRRAGRVLLPVARTAG
GDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAV
VRTVELVDVLPSEPHDVPMTHALTPERGLIALPCGE

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21425; Mature: 21294

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH
MLDVLLRRAGRVLLPVARTAGGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQ
HHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
ASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAVVRTVELVDVLPSEPHDVPM
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
THALTPERGLIALPCGE
EECCCCCCCEEEECCCC
>Mature Secondary Structure 
AIASKSALRDQLLAARRRVADDVRAAEARMLRGHLERMVTSDSTVCAYVPVGGEPGSIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH
MLDVLLRRAGRVLLPVARTAGGDLPLPLRWGEYRAGGLARARWGLLEPPEPWLPEAALAQ
HHHHHHHHCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
ASLVLVPALAVDRQSVRLGRGRGFYDRSLRCRDPHARLVAVVRTVELVDVLPSEPHDVPM
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
THALTPERGLIALPCGE
EECCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA