Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is echA6
Identifier: 121636828
GI number: 121636828
Start: 1038681
End: 1039412
Strand: Direct
Name: echA6
Synonym: BCG_0957
Alternate gene names: 121636828
Gene position: 1038681-1039412 (Clockwise)
Preceding gene: 121636824
Following gene: 121636829
Centisome position: 23.74
GC content: 64.75
Gene sequence:
>732_bases ATGATCGGTATCACCCAGGCAGAAGCCGTGCTGACCATTGAGCTGCAACGCCCGGAGCGCCGCAACGCCTTAAATTCCCA GCTGGTCGAGGAGCTTACGCAGGCCATCCGGAAAGCCGGGGATGGATCGGCTCGGGCGATCGTGCTGACCGGCCAAGGCA CCGCGTTCTGCGCTGGCGCGGACCTGAGCGGAGACGCATTCGCCGCCGATTATCCCGACCGGCTCATCGAGCTGCACAAG GCGATGGACGCCTCCCCGATGCCAGTGGTCGGCGCGATCAACGGTCCCGCCATCGGCGCCGGCTTGCAGCTTGCCATGCA ATGCGACCTGCGGGTTGTCGCGCCCGATGCCTTCTTCCAGTTTCCGACGTCGAAATACGGTCTGGCCCTGGATAACTGGA GCATCCGCCGGCTGTCGTCGTTGGTTGGGCACGGACGTGCCCGCGCGATGCTGCTCAGCGCGGAAAAGCTGACCGCCGAG ATCGCACTGCACACCGGAATGGCGAATCGCATTGGCACTTTGGCCGACGCCCAGGCCTGGGCCGCCGAGATCGCCAGGCT GGCACCACTGGCTATCCAGCACGCCAAGCGGGTGCTCAACGACGACGGCGCTATCGAGGAAGCGTGGCCGGCCCATAAGG AACTCTTCGACAAAGCCTGGGGCAGCCAGGATGTCATCGAAGCGCAGGTTGCCCGGATGGAAAAGCGGCCGCCGAAGTTC CAAGGGGCTTAA
Upstream 100 bases:
>100_bases TCGCTATCCCAGCTGACGAAAGATCCCCGGTCTAGCACCGCGTGCCGCAGTTGGTCGGTCGTGATACGACTCACGCGATG AGGCTATATAGGCTGACCCA
Downstream 100 bases:
>100_bases CCGCCATGGTGCGCCGAGCGCTACGACTGGCGGCCGGCACCGCCTCGCTGGCCGCCGGCACGTGGCTGTTGCGTGCGCTG CACGGCACGCCGGCCGCGCT
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHK AMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAE IALHTGMANRIGTLADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF QGA
Sequences:
>Translated_243_residues MIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHK AMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAE IALHTGMANRIGTLADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF QGA >Mature_243_residues MIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHK AMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAE IALHTGMANRIGTLADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF QGA
Specific function: Could possibly oxidize fatty acids using specific components
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family
Homologues:
Organism=Homo sapiens, GI70995211, Length=262, Percent_Identity=30.9160305343511, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI194097323, Length=239, Percent_Identity=31.3807531380753, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI25453481, Length=239, Percent_Identity=25.1046025104602, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI51538573, Length=239, Percent_Identity=25.1046025104602, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI4757968, Length=239, Percent_Identity=25.9414225941423, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI49355787, Length=239, Percent_Identity=25.9414225941423, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI4757966, Length=227, Percent_Identity=25.5506607929515, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI51538581, Length=227, Percent_Identity=25.5506607929515, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI221136756, Length=241, Percent_Identity=25.3112033195021, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI221136753, Length=241, Percent_Identity=25.3112033195021, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI221307494, Length=241, Percent_Identity=25.3112033195021, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI45643119, Length=212, Percent_Identity=25, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260275230, Length=212, Percent_Identity=25, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI260274832, Length=212, Percent_Identity=25, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI31542718, Length=188, Percent_Identity=26.5957446808511, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI116235487, Length=159, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI157694516, Length=237, Percent_Identity=22.7848101265823, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI213417737, Length=237, Percent_Identity=22.7848101265823, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787659, Length=249, Percent_Identity=33.7349397590361, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1788597, Length=251, Percent_Identity=28.6852589641434, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI221142681, Length=256, Percent_Identity=29.6875, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082183, Length=258, Percent_Identity=25.1937984496124, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787660, Length=251, Percent_Identity=30.6772908366534, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536985, Length=263, Percent_Identity=27.7566539923954, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25145438, Length=254, Percent_Identity=31.496062992126, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17554946, Length=248, Percent_Identity=29.8387096774194, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560910, Length=243, Percent_Identity=27.5720164609054, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17534483, Length=264, Percent_Identity=29.1666666666667, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17540714, Length=204, Percent_Identity=27.4509803921569, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17535521, Length=222, Percent_Identity=25.6756756756757, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17549921, Length=238, Percent_Identity=25.2100840336134, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558304, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25141363, Length=220, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI20129971, Length=245, Percent_Identity=28.9795918367347, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24653477, Length=245, Percent_Identity=28.9795918367347, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI19920382, Length=214, Percent_Identity=31.3084112149533, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI21357171, Length=207, Percent_Identity=29.4685990338164, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24653139, Length=254, Percent_Identity=24.8031496062992, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24650670, Length=247, Percent_Identity=26.7206477732794, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654903, Length=222, Percent_Identity=24.7747747747748, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922422, Length=256, Percent_Identity=24.609375, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ECHA6_MYCBO (P64015)
Other databases:
- EMBL: BX248337 - RefSeq: NP_854586.1 - ProteinModelPortal: P64015 - SMR: P64015 - EnsemblBacteria: EBMYCT00000016005 - GeneID: 1092860 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb0929 - GeneTree: EBGT00050000015506 - HOGENOM: HBG748731 - OMA: WPEHKEL - ProtClustDB: PRK07854 - BioCyc: MBOV233413:MB0929-MONOMER - BRENDA: 4.2.1.17 - InterPro: IPR001753 - InterPro: IPR018376
Pfam domain/function: PF00378 ECH
EC number: =4.2.1.17
Molecular weight: Translated: 26029; Mature: 26029
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGA CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECC DLSGDAFAADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQ CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHEEEECCEEEECCHHHHC FPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQAW CCCCCCCEEECCCHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHH AAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF HHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC QGA CCC >Mature Secondary Structure MIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGA CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECC DLSGDAFAADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQ CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHEEEECCEEEECCHHHHC FPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQAW CCCCCCCEEECCCHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHH AAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF HHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC QGA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972