Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636824
Identifier: 121636824
GI number: 121636824
Start: 1034431
End: 1034958
Strand: Direct
Name: 121636824
Synonym: BCG_0953
Alternate gene names: NA
Gene position: 1034431-1034958 (Clockwise)
Preceding gene: 121636823
Following gene: 121636828
Centisome position: 23.65
GC content: 67.42
Gene sequence:
>528_bases ATGGAACACGTGCACTGGTGGCTGGCGGGCCTGGCGTTCACGCTCGGGATGGTGCTGACGTCGACGCTGATGGTCCGGCC CGTCGAACATCAAGTGCTGGTAAAGAAATCGGTCCGCGGGTCAAGCGCTAAGTCCAAGCCGCCAACGGCGAGAAAACCCG CCGTCAAGTCGGGCACCAAGAGAGAGGAGTCGCCGACGGCGAAGACCAAGGTGGCAACGGAGTCTGCTGCGGAGCAGATC CCGGTTGCCGGGGAGCCCGCGGCGGAGCCGATCCCGGTCGCCGGCGAGCCGGCGGCGCGTATTCCGGTGGTTCCGTACGC GCCGTACGGCCCGGGCTCGGCGCGCGCTGGTGCCGATGGCAGCGGACCGCAGGGGTGGCTGGTGAAGGGCCGCTCGGACA CCAGGCTCTACTACACTCCCGAAGATCCGACGTACGACCCTACTGTCGCCCAGGTTTGGTTCCAGGACGAGGAGTCGGCA GCGCGGGCGTTTTTCACGCCGTGGCGCAAGAGCACACGGCGGACATGA
Upstream 100 bases:
>100_bases CGGCTGTTGCCTGGGTAGTCGTCACTCTGTCGATCAAGCGCGCCAGCCGTGATGAGGGTGCTGCGGAGGCGCCCAGTGCA GCCGAGACAGGCGCACAGTG
Downstream 100 bases:
>100_bases GGTCAGGGCCGCAGGGCTAACTGGGCCCGGGAAGGCGCAACACGAGGCGCGCGCCACCCAGCGGGCTGTTCTCCAGCGAC GCGGTGCCGCCGTGCAACTG
Product: putative exported or membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MEHVHWWLAGLAFTLGMVLTSTLMVRPVEHQVLVKKSVRGSSAKSKPPTARKPAVKSGTKREESPTAKTKVATESAAEQI PVAGEPAAEPIPVAGEPAARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDEESA ARAFFTPWRKSTRRT
Sequences:
>Translated_175_residues MEHVHWWLAGLAFTLGMVLTSTLMVRPVEHQVLVKKSVRGSSAKSKPPTARKPAVKSGTKREESPTAKTKVATESAAEQI PVAGEPAAEPIPVAGEPAARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDEESA ARAFFTPWRKSTRRT >Mature_175_residues MEHVHWWLAGLAFTLGMVLTSTLMVRPVEHQVLVKKSVRGSSAKSKPPTARKPAVKSGTKREESPTAKTKVATESAAEQI PVAGEPAAEPIPVAGEPAARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDEESA ARAFFTPWRKSTRRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y901_MYCTU (P64757)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: B70783 - RefSeq: NP_215416.1 - RefSeq: NP_335357.1 - EnsemblBacteria: EBMYCT00000000403 - EnsemblBacteria: EBMYCT00000072953 - GeneID: 885203 - GeneID: 926239 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0924 - KEGG: mtu:Rv0901 - TIGR: MT0924 - TubercuList: Rv0901 - GeneTree: EBGT00050000014976 - HOGENOM: HBG569683 - OMA: SKSTHRK - ProtClustDB: CLSK790820
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18910; Mature: 18910
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHVHWWLAGLAFTLGMVLTSTLMVRPVEHQVLVKKSVRGSSAKSKPPTARKPAVKSGTK CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC REESPTAKTKVATESAAEQIPVAGEPAAEPIPVAGEPAARIPVVPYAPYGPGSARAGADG CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDEESAARAFFTPWRKSTRRT CCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MEHVHWWLAGLAFTLGMVLTSTLMVRPVEHQVLVKKSVRGSSAKSKPPTARKPAVKSGTK CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC REESPTAKTKVATESAAEQIPVAGEPAAEPIPVAGEPAARIPVVPYAPYGPGSARAGADG CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDEESAARAFFTPWRKSTRRT CCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036