Click here to switch to the map view.

The map label for this gene is lpqS

Identifier: 121636770

GI number: 121636770

Start: 974849

End: 975241

Strand: Direct

Name: lpqS

Synonym: BCG_0899

Alternate gene names: NA

Gene position: 974849-975241 (Clockwise)

Preceding gene: 121636768

Following gene: 121636771

Centisome position: 22.28

GC content: 69.21

Gene sequence:

>393_bases
GTGGTGTGGATGCGATCGGCGATTGTCGCGGTCGCGCTGGGGGTGACGGTAGCCGCCGTCGCCGCTGCATGCTGGCTCCC
CCAGCTCCACCGTCATGTGGCTCACCCAAACCACCCGTTGACGACGTCCGTAGGTAGCGAATTCGTCATCAACACCGACC
ACGGGCACCTGGTGGACAACTCGATGCCACCGTGCCCGGAACGGCTCGCGACGGCGGTGCTGCCGCGCTCCGCCACTCCG
GTGTTACTACCAGACGTCGTGGCGGCTGCGCCCGGCATGACAGCCGCGCTTACCGACCCCGTCGCGCCGGCCGCGCGCGG
TCCGCCGGCGGCGCAGGGATCCGTTCGCACCGGTCAAGACCTGTTGACCCGGTTCTGCCTGGTTCGTCGCTGA

Upstream 100 bases:

>100_bases
ACATCGGGCAGTACGCAACGGTTGATGATCACCACGCCATCATCCGCCCTTACGCCCTACCCCTATAGGGTATATAGTGG
GCCACGTGGAAAGCGGGCAC

Downstream 100 bases:

>100_bases
GGGGTCAGCGCCAGGCGGTGGTGGCCATTCGCCATCGCCGGTGACCGCTGACCCCCATCCAGTGCCGCGTGTGACTTCCG
GCCCCGATGCAGAAGCGACG

Product: putative lipoprotein lpqS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP
VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLVRR

Sequences:

>Translated_130_residues
MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP
VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLVRR
>Mature_130_residues
MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP
VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13547; Mature: 13547

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
SMPPCPERLATAVLPRSATPVLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQD
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH
LLTRFCLVRR
HHHHHHHHCC
>Mature Secondary Structure
MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
SMPPCPERLATAVLPRSATPVLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQD
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH
LLTRFCLVRR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA