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The map label for this gene is glnR [H]

Identifier: 121636742

GI number: 121636742

Start: 941394

End: 942161

Strand: Direct

Name: glnR [H]

Synonym: BCG_0870

Alternate gene names: 121636742

Gene position: 941394-942161 (Clockwise)

Preceding gene: 121636736

Following gene: 121636743

Centisome position: 21.52

GC content: 67.71

Gene sequence:

>768_bases
TTGTTGGAGTTATTACTGCTGACCTCGGAGCTGTATCCGGATCCGGTCCTGCCGGCGCTGTCGCTGCTGCCCCACACCGT
GCGGACGGCGCCGGCCGAGGCGTCTTCGTTGCTGGAGGCGGGAAACGCAGACGCTGTGCTCGTCGACGCGCGCAACGACC
TGTCGTCCGGGCGAGGCCTGTGCCGCCTGTTGAGCTCGACCGGCCGGTCGATCCCGGTACTGGCGGTGGTGAGCGAAGGC
GGGCTGGTGGCGGTCAGCGCTGACTGGGGGCTGGACGAGATCCTGCTGCCCAGCACCGGGCCCGCTGAGATCGACGCCAG
ACTGCGGCTGGTGGTTGGCCGGCGCGGAGATCTGGCTGACCAGGAGAGTCTGGGCAAGGTGAGCCTGGGCGAGCTGGTGA
TCGACGAAGGCACCTACACCGCCCGGCTGCGTGGCCGCCCGCTGGATCTCACCTACAAAGAGTTCGAGCTGCTGAAATAC
CTGGCGCAGCATGCCGGCCGGGTGTTCACTCGGGCGCAGCTGCTGCACGAAGTATGGGGGTATGACTTCTTCGGGGGCAC
CCGGACTGTTGATGTGCACGTGCGGCGGTTGCGGGCCAAACTCGGCCCCGAGCATGAAGCGCTGATCGGCACGGTGCGCA
ACGTCGGATACAAAGCTGTTCGGCCGGCGCGCGGCCGACCGCCGGCCGCGGACCCCGACGACGAAGACGCCGATCCCGGC
CGGGATGGTATGCAAGAACCACTGGTCGACCCGTTGCGCAGTCAGTGA

Upstream 100 bases:

>100_bases
GAGCGCCTCGTCAGGCGGCACGTTATCGTTAGATGAGCTGCCGCTACCGTCACATGGCGCGATGAACTGGGAGACGCCTT
TCCCACGACGCTGGAGGGGC

Downstream 100 bases:

>100_bases
CGGCGCTTGACTGGCGCTCCGCTCTGACCGCCGACGAGCAGCGCAGCGTGCGTGCACTGGTCACGGCGACAACAGCAGTC
GATGGGGTAGCACCCGTGGG

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLCRLLSSTGRSIPVLAVVSEG
GLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKY
LAQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPG
RDGMQEPLVDPLRSQ

Sequences:

>Translated_255_residues
MLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLCRLLSSTGRSIPVLAVVSEG
GLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKY
LAQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPG
RDGMQEPLVDPLRSQ
>Mature_255_residues
MLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLCRLLSSTGRSIPVLAVVSEG
GLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKY
LAQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPG
RDGMQEPLVDPLRSQ

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786599, Length=204, Percent_Identity=31.8627450980392, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786784, Length=181, Percent_Identity=31.4917127071823, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788394, Length=202, Percent_Identity=29.7029702970297, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=30.2752293577982, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082012, Length=135, Percent_Identity=34.8148148148148, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789809, Length=171, Percent_Identity=28.6549707602339, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790860, Length=178, Percent_Identity=31.4606741573034, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790552, Length=194, Percent_Identity=29.3814432989691, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGL
CEEEEEEHHHHCCCCCHHHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
CRLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLAD
HHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCC
QESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWG
HHHCCCEECCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPG
CCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
RDGMQEPLVDPLRSQ
CCCCHHHHHHHHCCC
>Mature Secondary Structure
MLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGL
CEEEEEEHHHHCCCCCHHHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
CRLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLAD
HHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCC
QESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWG
HHHCCCEECCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPG
CCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
RDGMQEPLVDPLRSQ
CCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]